Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1414121	1414123	3	22 [0]	[0] 16	intR	integrase

GTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGG  >  W3110S.gb/1414124‑1414185 |                                                              gtgtTACTGTTCGGATCCCGGCATTTTTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:1134531/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTgggg                            >  1:2478703/1‑36 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:1101021/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:1218788/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:1227601/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:1280814/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:1340373/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:1517685/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:2003496/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:251053/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:2904316/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:576474/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:611567/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:616019/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAgg  >  1:976232/1‑62 (MQ=255) gtgtTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAg   >  1:571184/1‑61 (MQ=255) |                                                              GTGTTACTGTTCGGATCCCGGCATTTGTTTTTGGGGGACCGAACATATCAAGTATCGTCAGG  >  W3110S.gb/1414124‑1414185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑