Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3582682	3582744	63	43 [0]	[0] 72	glnG	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)

AGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGC  >  W3110S.gb/3582636‑3582681                                              | agagCTCTGCGTTCCGGTCATCAAAATCTGATTTCCGAAGCGCAGc  >  1:1163895/1‑46 (MQ=38) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:681932/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:325494/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:399974/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:406274/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:452327/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:472486/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:55118/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:594632/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:596619/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:638464/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:649937/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:231001/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:704750/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:70738/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:71249/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:774337/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:796128/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:878674/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:901367/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:908680/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:930732/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1403491/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1035554/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1054810/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1068784/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1110708/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1200967/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1221587/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1264284/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1280605/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1371240/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1380383/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:295395/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1434261/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1519573/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1608477/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:218171/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:227100/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:229737/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:230018/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:230105/1‑46 (MQ=255) agagCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGc  >  1:1015761/1‑46 (MQ=255)                                              | AGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGC  >  W3110S.gb/3582636‑3582681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑