Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3582682	3582744	63	43 [0]	[0] 72	glnG	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)

CGGCGCGGCTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGAT  >  W3110S.gb/3582745‑3582805 |                                                             cggcgcggcTACTCTGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:970203/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGAcgcg                       >  1:1108272/1‑40 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTaaaa             >  1:769523/1‑50 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTaaa              >  1:126831/1‑49 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTa                >  1:144145/1‑47 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAaga           >  1:1124396/1‑52 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTgggg    >  1:219747/1‑59 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTgggg    >  1:481564/1‑59 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:559539/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:731850/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:550962/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:543954/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:538912/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:517602/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:443206/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:412013/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:407648/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:394279/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:341571/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:301101/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:203833/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:590773/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:623454/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:669524/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1633370/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:791591/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:807469/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:812942/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:830882/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:848103/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:862243/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:867881/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:869428/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:887388/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:933618/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:976973/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:978147/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1229559/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1364855/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1305496/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1301489/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1256133/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1252693/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1239661/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1234847/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1232637/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1376225/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1182218/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1120788/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1108573/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1064271/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1053820/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1047241/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:104311/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1419711/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1008653/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:161170/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1604679/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1569865/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1535885/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1505258/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:143520/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:142787/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1643139/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1415045/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1413393/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1402745/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1401128/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:13981/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:1389790/1‑60 (MQ=255) cggcgcggcTACTCGGCTGGGGCCGCAACACCATGACGCGTAAGTTAAAAGAGCTGGGGAt  >  1:839437/1‑61 (MQ=255) cggagcggcTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGa   >  1:606440/1‑60 (MQ=255) |                                                             CGGCGCGGCTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGAT  >  W3110S.gb/3582745‑3582805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑