Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4553436	4553466	31	95 [0]	[0] 67	fimG	minor component of type 1 fimbriae

GCACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTC  >  W3110S.gb/4553374‑4553435                                                              | gcACTTCCTGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:566128/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAGCCATTc  <  1:683636/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:405039/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:552837/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:531525/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:501962/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:482987/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:470377/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:451521/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:432695/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:430463/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:422580/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:40769/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:209718/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:39896/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:389235/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:376046/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:330113/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:320748/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:30944/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:269474/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:261231/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:213440/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1057202/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:64521/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:92461/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:90839/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:865830/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:850661/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:736771/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:735523/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:714723/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:703146/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:662657/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:655530/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:561955/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:633631/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:608564/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:606056/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:598195/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:592065/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:591010/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:586827/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:583377/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:572631/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:5683/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1205912/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1398794/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1390833/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1375561/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1330137/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1324743/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1303314/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:129245/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1290692/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1287018/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1222175/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1220276/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:200945/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1189024/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1168377/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1151672/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1127106/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1114836/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1109414/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1105938/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1104088/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1091509/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1025400/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1457587/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:208054/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:193737/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1650106/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:161732/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:160532/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1590291/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1536459/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1535644/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1521005/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1515091/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1512499/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1495845/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1485023/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1476951/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1460247/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1409237/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGACACTCAGGGAACCATTc  <  1:817262/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGCAGCCACTCAGGGAACCATTc  <  1:10967/62‑1 (MQ=255) gcACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATCGCGGAGCCACTCAGGGAACCATTc  <  1:1563722/62‑1 (MQ=255)  ctcTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:425504/59‑1 (MQ=255)  cACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:999452/61‑1 (MQ=255)    cTTCCCGTTACTGGTCAGAGGATTGACAGTAAATGGCGGAGCCACTCAGGGAACCTTTc  <  1:519044/59‑1 (MQ=255)       cccGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1572317/56‑1 (MQ=255)                     gagCATTGACAGTAAATGGCGTAGCCACTCAGGGAACCATTc  <  1:1495495/42‑1 (MQ=255)                           tGACAGTAAATGGCGGAGCCACTCAGGGAACCATTc  <  1:1348010/36‑1 (MQ=255)                                                              | GCACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTC  >  W3110S.gb/4553374‑4553435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑