Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4553436	4553466	31	95 [0]	[0] 67	fimG	minor component of type 1 fimbriae

CTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTG  >  W3110S.gb/4553467‑4553517 |                                                   cTGAACCCGAAGAGATGATTGTAATGAAACGAGtta                 >  1:531391/1‑36 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCt   >  1:970066/1‑50 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:410596/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:599332/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:57986/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:575866/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:561885/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:495817/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:470765/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:437458/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:605706/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:40608/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:392268/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:356200/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:340618/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:315560/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:274438/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:260646/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:233375/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:619262/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:636779/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:651648/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:671806/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:698955/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:709225/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:748493/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:774435/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:81723/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:828028/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:849932/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:904033/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:959340/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:967457/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:970486/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:121851/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1300126/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1284512/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1283983/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1282223/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1241544/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1234929/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1221226/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1220993/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1306659/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:117757/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1170249/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1168811/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1158565/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1099863/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:108097/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1077232/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1053878/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1360426/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1364589/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1401722/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:143876/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1456792/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1484808/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1504672/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1531864/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1611020/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1611376/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1617013/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:1619458/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:163709/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:178594/1‑51 (MQ=255) cTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTg  >  1:225742/1‑51 (MQ=255) |                                                   CTGAACCCGAAGAGATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTG  >  W3110S.gb/4553467‑4553517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑