Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 249132 249559 428 126 [0] [0] 53 fhiA ECK0230:JW5811:b0229; flagellar system protein, promoterless fragment

Only 100 of 126 total aligned reads displayed.

CTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGA  >  W3110S.gb/249096‑249131
                                   |
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:272610/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:513891/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:505221/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:494089/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:47795/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:47252/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:438121/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:430470/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:426531/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:409537/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:39568/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:374577/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:305819/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:54626/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:218099/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:206533/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:194121/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:189715/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:166959/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:164554/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1631665/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1629712/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1625090/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1623140/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1621952/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:825700/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:981825/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:975771/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:97316/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:966681/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:939089/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:934723/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:930871/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:875835/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:866946/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:865724/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:863275/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:840750/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1609650/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:792539/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:751603/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:716300/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:667890/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:655686/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:633745/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:612545/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:605815/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:602785/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:590228/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:582488/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1158237/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1279803/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1248693/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1240170/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1239929/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1233738/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1214275/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1208113/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1197417/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1191988/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1186835/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:118253/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1167670/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1288888/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1135028/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1110838/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1078894/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1078038/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1063716/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1058752/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1056826/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1056063/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1023063/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:100581/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1003827/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1290107/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1596703/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1589282/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1559481/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1551809/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1549841/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1530146/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:151923/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1508808/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1508701/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1505659/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1494694/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1486303/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1476878/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1456563/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1429057/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1414493/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1406584/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1402810/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1378658/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1355189/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1343947/36‑1 (MQ=255)
cTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1002357/36‑1 (MQ=255)
cTGCACGCCGGCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1604924/36‑1 (MQ=255)
 tGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGa  <  1:1576521/35‑1 (MQ=255)
                                   |
CTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGA  >  W3110S.gb/249096‑249131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑