Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1174582	1174842	261	46 [0]	[0] 40	mfd	transcription‑repair coupling factor

TTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCA  >  W3110S.gb/1174521‑1174581                                                             | tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACTCGCAGCCa  <  1:14217/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:628104/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1066764/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:227576/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:262534/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:282180/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:314333/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:406987/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:504171/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:536684/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:571516/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:590362/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:195688/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:635133/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:636494/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:723500/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:735979/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:781224/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:844023/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:872784/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:908982/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:946532/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:948324/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1590293/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1169971/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1171739/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:118768/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1198089/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1198335/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1249977/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1342816/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1349818/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:135977/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1387216/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1387749/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1407529/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1447393/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1570177/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1576273/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1578977/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:15802/61‑1 (MQ=255) tttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1583544/61‑1 (MQ=255)  ttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:719861/60‑1 (MQ=255)  ttttAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:190108/60‑1 (MQ=255)            aCCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:841068/50‑1 (MQ=255)             cccGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCa  <  1:1372789/49‑1 (MQ=255)                                                             | TTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCA  >  W3110S.gb/1174521‑1174581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑