Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1964275	1964516	242	33 [0]	[0] 80	[flhE]	[flhE]

TGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAG  >  W3110S.gb/1964213‑1964274                                                              | tGATAAATAATTGGAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:769817/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:402296/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:997604/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:884448/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:869611/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:868210/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:865709/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:860349/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:855407/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:834923/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:817174/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:812583/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:625424/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:569009/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:428976/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:416627/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:1515240/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:1142548/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:1144459/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:1158182/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:1189641/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:1264309/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:1266848/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:1468546/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:1053113/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:155702/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:1564873/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:189800/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:201079/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:211301/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:284429/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:293468/1‑62 (MQ=255) tGATAAATAATTGCAACAAGACATCGAGCATTTTTCACTGAGTTATTAAACATACTCGCGAg  >  1:959217/1‑62 (MQ=255)                                                              | TGATAAATAATTGCAACAAGACATCGAGCCTTTTTCACTGAGTTATTAAACATACTCGCGAG  >  W3110S.gb/1964213‑1964274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑