New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 4010766	52 (0.920)	3 (0.060)	3/92	NT	5.5%	coding (952/1068 nt)	yhiI	predicted HlyD family secretion protein
	?	W3110S.gb	= 4010799	57 (1.120)					coding (985/1068 nt)	yhiI	predicted HlyD family secretion protein

CACGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/4010693‑4010766 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggTTTTGACATATTCCAGATGCTGCTGGAGTAATTCCGGTGGGATACGCGCTTTGACGCGGAACATCAGT  <  W3110S.gb/4010799‑4010732                                                                                                                                                CACGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCAC                                                                         >  1:4602446/1‑71  ACGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACC                                                                        <  1:931676/71‑1   CGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACCG                                                                       >  1:1667915/1‑71   CGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACCG                                                                       >  1:3025776/1‑71            CCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCA                                                                          >  1:2749681/1‑59                              AACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACCGGTTTTGACA                                                              <  1:1562301/53‑1                                         CTGATGTTCCGCGTCAAAGCGCGTATCCCACCGGTTTTGACATATTCCAGATGCTGCTGGAGTAATTCCGG                                 <  1:3294587/71‑1                                            ATGTTCCGCGTCAAAGCGCGTATCCCACCGGTTTTGACATATTCCAGATGCTGCTGGAGTAATTCCGGTG                               <  1:2660015/70‑1                                                                      ACCGGTTTTGACATATTCCAGATGCTGCTGGAGTAATTCCGGTGGGATACGCGCTTTGACG              <  1:2402485/61‑1                                                                      ACCGGTTTTGACATATTCCAGATGCTGCTGGAGTAATTCCGGT                                <  1:4955419/43‑1                                                                        CGGTTTTGACATATTCCAGATGCTGCTGGAGTAATTCCGGTGGGATACGCGCTTTGACGCGGAACATCAGT  >  1:4700398/1‑71                                                                         GGTTTTGACATATTCCAGATGCTGCTGGAGTAATTCCGGTGGGATACGCGCTTT                  >  1:1286974/1‑54                                                                                                                                                CACGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/4010693‑4010766 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggTTTTGACATATTCCAGATGCTGCTGGAGTAATTCCGGTGGGATACGCGCTTTGACGCGGAACATCAGT  <  W3110S.gb/4010799‑4010732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.