| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 4010766 | 52 (0.920) | 3 (0.060) | 3/92 | NT | 5.5% | coding (952/1068 nt) | yhiI | predicted HlyD family secretion protein |
| ? | W3110S.gb | = 4010799 | 57 (1.120) | coding (985/1068 nt) | yhiI | predicted HlyD family secretion protein | |||||
ACTGATGTTCCGCGTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCGTGGTGAG > W3110S.gb/4010732‑4010869 | aCTGATGTTCCGCGTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAAccg > 1:4700398‑M2/1‑68 (MQ=255) aTGTTCCGCGTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGttt < 1:1511558/71‑1 (MQ=255) ttCCGCGTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGTTTTGcc < 1:672777/71‑1 (MQ=255) ccGCGTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCgg > 1:2987835/1‑71 (MQ=255) cgTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAAccggt < 1:2402485‑M2/61‑6 (MQ=255) cgTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCg > 1:2368215/1‑71 (MQ=255) gTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCg > 1:1773379/1‑70 (MQ=255) cAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAg > 1:2300180/1‑71 (MQ=255) cAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAg > 1:2728410/1‑71 (MQ=255) aaaGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAAcc > 1:1286974‑M2/1‑52 (MQ=255) aaaGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGc < 1:1936353/71‑1 (MQ=255) aaaGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGc > 1:5047783/1‑71 (MQ=255) cgcgTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGt < 1:5111149/64‑1 (MQ=255) gcgTATCCCTCCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGt < 1:1446767/68‑1 (MQ=255) gcgTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTggg > 1:1148551/1‑71 (MQ=255) gcgTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTggg > 1:2688946/1‑71 (MQ=255) gcgTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTgg > 1:3928800/1‑70 (MQ=255) gTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGcc < 1:1635311/55‑1 (MQ=255) gTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGc > 1:3959753/1‑59 (MQ=255) gTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGt < 1:1757100/70‑1 (MQ=255) taccACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCgg > 1:1386772/3‑71 (MQ=255) tCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGc > 1:4915016/1‑56 (MQ=255) tCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCg < 1:2067521/70‑1 (MQ=255) ccACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTgg > 1:241578/1‑63 (MQ=255) cACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAAccggtgggatacgcgctttgacgcggaacat < 1:2660015‑M2/70‑32 (MQ=255) aCCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAAccggt < 1:4955419‑M2/43‑6 (MQ=255) aCCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGtga < 1:2025300/71‑1 (MQ=255) ccGGAATTACTCCAGCAGCATCTGGAATATGTCAAAAccggtgggatacgcgctttgacgcggaacatcag < 1:3294587‑M2/71‑35 (MQ=255) ccGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGtt > 1:192035/1‑43 (MQ=255) ccGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGtt > 1:1412076/1‑43 (MQ=255) cGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGt < 1:3935531/52‑1 (MQ=255) cGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGtgaat < 1:4554555/71‑1 (MQ=255) cGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGtgaa > 1:3713101/1‑70 (MQ=255) cGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGtgaa > 1:3279061/1‑70 (MQ=255) ggAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTgg > 1:2600004/1‑58 (MQ=255) ggAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGtgaatg < 1:1998461/71‑1 (MQ=255) aTTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGtgaatg > 1:4039402/1‑68 (MQ=255) aTTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATgaag < 1:4953501/71‑1 (MQ=255) aTTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATgaag < 1:4213627/71‑1 (MQ=255) aCTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAAc > 1:4819046/1‑71 (MQ=255) cTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAAc < 1:2479974/70‑1 (MQ=255) tCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTg < 1:814212/49‑1 (MQ=255) cagcagCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTgg > 1:3835250/1‑48 (MQ=255) agcagcATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCg > 1:4118537/1‑44 (MQ=255) agcagcATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCg > 1:3861022/1‑44 (MQ=255) agcagcATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCg < 1:4056127/71‑1 (MQ=255) gcagcaTCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGtgaatgaa > 1:4183312/1‑61 (MQ=255) gcagcaTCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGt > 1:2008128/1‑71 (MQ=255) gcagcaTCTGGAATATGTCAAAACCGGGTTGCCGGGCGTAGCGTGGGTGCGGGtgaatgaa > 1:2538946/1‑61 (MQ=255) agcaTCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGtgaatgaa > 1:3348133/1‑59 (MQ=255) aTCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGc > 1:1752707/1‑37 (MQ=255) aTCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTgg > 1:3768232/1‑41 (MQ=255) aTCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTgg > 1:4172479/1‑41 (MQ=255) tCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGc < 1:2465281/44‑1 (MQ=255) tCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGc < 1:5113576/68‑1 (MQ=255) tCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCt > 1:2562815/1‑70 (MQ=255) ggAATATGTCAAAACCGGTTTGCCGGGCGTAGCGt < 1:3606813/35‑1 (MQ=255) gAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTgacga > 1:3498358/1‑71 (MQ=255) gAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTg < 1:3942055/67‑1 (MQ=255) gAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTg < 1:178830/67‑1 (MQ=255) aaTATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTgacgac > 1:5022405/1‑71 (MQ=255) aaTATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTga > 1:2564377/1‑67 (MQ=255) atatGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGAcc < 1:3347643/71‑1 (MQ=255) atatGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGAcc > 1:4880449/1‑71 (MQ=255) tatGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGACTGACGAcc < 1:2122350/70‑1 (MQ=255) tGTCAAAAccggtgggatacgcgctttgacgcggaacatcagtttcagccgtt < 1:1562301‑M2/53‑46 (MQ=255) tGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGtga > 1:857144/1‑41 (MQ=255) tGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTc < 1:3039586/70‑1 (MQ=255) tGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCg < 1:2683234/71‑1 (MQ=255) cAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCgtgg > 1:2828794/1‑71 (MQ=255) aaaCCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTgac < 1:4627515/59‑1 (MQ=255) aaaCCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCgtggtg < 1:186811/71‑1 (MQ=255) aaaCCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCgtggt > 1:3263870/1‑70 (MQ=255) aaCCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCgtggt > 1:1268953/1‑69 (MQ=255) aCCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTgacga > 1:604231/1‑59 (MQ=255) aCCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCGTGGTGAg > 1:2668304/1‑71 (MQ=255) aCCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCGTGGTGAg > 1:1206521/1‑71 (MQ=255) | ACTGATGTTCCGCGTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCGTGGTGAG > W3110S.gb/4010732‑4010869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |