| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 154410 = | 59 (1.050) | 4 (0.070) | 3/102 | NT | 6.7% | coding (1017/2598 nt) | htrE | predicted outer membrane usher protein |
| ? | W3110S.gb | 154431 = | 53 (0.940) | coding (996/2598 nt) | htrE | predicted outer membrane usher protein | |||||
AACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCTGGCGGCACCGTC > W3110S.gb/154363‑154500 | aaCATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTaa > 1:3856882/1‑70 (MQ=255) aCATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAAc > 1:3021921/1‑70 (MQ=255) cATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACa > 1:4196909/1‑70 (MQ=255) aTTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACaa > 1:4989016/1‑70 (MQ=255) tttGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACa < 1:4289780/68‑1 (MQ=255) tttGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATa < 1:1122655/71‑1 (MQ=255) ttGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACaa > 1:2378218/1‑68 (MQ=255) tGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAAt > 1:497636/1‑68 (MQ=255) acaacGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAAt > 1:2188835/1‑65 (MQ=255) acaacGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATc < 1:1442216/71‑1 (MQ=255) acaacGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATc < 1:1448141/71‑1 (MQ=255) caacGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCg > 1:1115255/1‑71 (MQ=255) aacGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGc < 1:3420693/71‑1 (MQ=255) gagtccgtcagggtacggcagcgatcttattgttGCCATCGGATTCTTCGATGGTAACa < 1:4900620‑M1/25‑1 (MQ=255) gagtccgtcagggtacggcagcgatcttattgttGCCATCGGATTCTTCGATGGTAACa < 1:1994906‑M1/25‑1 (MQ=255) cGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTg > 1:2410198/1‑71 (MQ=255) aTGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCg < 1:1038653/71‑1 (MQ=255) agaAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTTACAATAAGATCGCTGCCGTAc > 1:137246/1‑71 (MQ=255) agaAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTAc < 1:4287059/71‑1 (MQ=255) gaAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTg < 1:3318162/64‑1 (MQ=255) gaAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTg < 1:1075173/64‑1 (MQ=255) aaaGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTTACAATAAGa < 1:119518/57‑1 (MQ=255) aaaGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTAccc > 1:805184/1‑71 (MQ=255) aaGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCt < 1:2271520/71‑1 (MQ=255) aaGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCt < 1:751359/71‑1 (MQ=255) aGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCt > 1:2576822/1‑70 (MQ=255) gggtGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTg < 1:1741410/67‑1 (MQ=255) ggTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGa < 1:5020021/71‑1 (MQ=255) ttGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACg < 1:1928387/71‑1 (MQ=255) cGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGAc < 1:3912465/71‑1 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATa > 1:2364602/1‑43 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTg < 1:1019798/62‑1 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTg < 1:2889381/62‑1 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:2278033/1‑69 (MQ=255) aaTGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAg < 1:1387136/71‑1 (MQ=255) aTGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAg < 1:2562367/70‑1 (MQ=255) tCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATaa > 1:1056556/1‑39 (MQ=255) tCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGAt > 1:686662/1‑42 (MQ=255) tCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGAt > 1:2504469/1‑42 (MQ=255) ccGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGatca < 1:407982/70‑1 (MQ=255) cGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGatcatc < 1:4691880/71‑1 (MQ=255) tttGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTg < 1:1563460/52‑1 (MQ=255) tttGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAAt > 1:3333676/1‑71 (MQ=255) tttGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAAt > 1:3119688/1‑71 (MQ=255) tgttaccatcgaagaatccgatggcAACAATAAGATCGCTGCCGTACCCTGACGGACTc < 1:1994906‑M2/34‑1 (MQ=255) tgttaccatcgaagaatccgatggcAACAATAAGATCGCTGCCGTACCCTGACGGACTc < 1:4900620‑M2/34‑1 (MQ=255) tGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCGTGACGGACTCAGATCATCAAt < 1:1066997/69‑1 (MQ=255) tGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCaa < 1:4653827/68‑1 (MQ=255) tGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAAt < 1:4195641/69‑1 (MQ=255) gCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGa < 1:3930562/71‑1 (MQ=255) accatcgaagaatccgatggcAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:177898‑M2/22‑54 (MQ=255) catcgaagaatccgatggcAACAATAAGATCGCTGCCGTACCCTGACg < 1:2267255‑M2/29‑1 (MQ=255) aTCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGatcatc > 1:2516141/1‑60 (MQ=255) tCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAgc < 1:4886261/71‑1 (MQ=255) tCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAg > 1:4537693/1‑70 (MQ=255) ggATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGa > 1:4678108/1‑62 (MQ=255) ggATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAgcgc > 1:4022772/1‑71 (MQ=255) gATTCTTCGATGGTAACAATAAGATAGCTGCCGTa > 1:1482001/1‑35 (MQ=255) ttcttcGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAgcgc < 1:625167/68‑1 (MQ=255) ttcGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAgcgc > 1:4265239/1‑65 (MQ=255) tcGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCTggcgg > 1:478046/1‑71 (MQ=255) cGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGat > 1:359624/1‑45 (MQ=255) cGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCTggcgg < 1:4655060/70‑1 (MQ=255) cGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCTggcg < 1:2165590/69‑1 (MQ=255) gATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCTGGCGGCa > 1:4828060/1‑71 (MQ=255) gTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCTGGCGGCACcgt < 1:4823649/71‑1 (MQ=255) gTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCTGGCGGCACcg < 1:4357529/70‑1 (MQ=255) tAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATg < 1:606644/47‑1 (MQ=255) tAACAATAAGAGCGCTGCCGTACCCTGACTGACTCAGATCATCAATGACGAAAGCGCCTGGCGGCACcggc < 1:1950403/71‑3 (MQ=255) aaCAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCTGGCGGCACcgtc > 1:131633/1‑70 (MQ=255) | AACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCTGGCGGCACCGTC > W3110S.gb/154363‑154500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |