| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 225680 = | 30 (0.530) | 4 (0.080) | 3/90 | NT | 13.1% | intergenic (+105/‑79) | alaV/rrlH | tRNA‑Ala/23S ribosomal RNA |
| ? | W3110S.gb | = 3468101 | NA (NA) | intergenic (‑61/+133) | rrlB/gltT | 23S ribosomal RNA/tRNA‑Glu | |||||
CACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAA > W3110S.gb/3468042‑3468170 | cacaACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACtctc > 1:1088893/1‑71 (MQ=34)cacaACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACtctc > 1:2918789/1‑71 (MQ=34)cacaACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACtctc > 1:4765737/1‑71 (MQ=34) caACCCGAAGATGTTTCTTTCGATTCTTCATCGTGTTGCGAAAATTTGAGTGACTCACGAACAACtctc < 1:300516/69‑1 (MQ=11) aaCCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCgtt < 1:2521150/71‑1 (MQ=34) cccGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCgttg < 1:1535500/70‑1 (MQ=35) cccGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCgttg < 1:547160/70‑1 (MQ=35) ccGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCgttgtt > 1:4964737/1‑71 (MQ=34) ccGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCgtt < 1:1895703/68‑1 (MQ=35) gAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCa < 1:1640276/71‑1 (MQ=34) gAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCa < 1:2746488/71‑1 (MQ=34) gAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCa < 1:4182357/71‑1 (MQ=34) gAAGATGTATCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACtctc > 1:2055603/1‑63 (MQ=25) aGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAgt > 1:200674/1‑71 (MQ=34) aGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAgt > 1:2136437/1‑71 (MQ=34) aGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAg < 1:1016568/70‑1 (MQ=35) gATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCa > 1:2878403/1‑68 (MQ=35) gATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAgtg > 1:4536729/1‑71 (MQ=34) gTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCgtt > 1:4294389/1‑60 (MQ=35) gTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCgtt > 1:2063655/1‑60 (MQ=35) ttctttcGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTc < 1:4607806/62‑1 (MQ=35) ttctttcGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTc < 1:5148109/62‑1 (MQ=35) tctttcGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCaa > 1:71967/1‑71 (MQ=34) tttcGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCaa < 1:3849692/69‑1 (MQ=35) ttcGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAAttt > 1:973456/1‑71 (MQ=34) tcGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCa > 1:2009199/1‑58 (MQ=35) tcGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAgtgt > 1:1925936/1‑62 (MQ=35) tcGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAAtttt > 1:4169423/1‑71 (MQ=34) tcGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAAtt < 1:2586313/69‑1 (MQ=35) cGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAAtttt < 1:397376/70‑1 (MQ=35) ttCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTc > 1:353845/1‑53 (MQ=35) catcatCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCt < 1:2965344/70‑1 (MQ=35) atcatcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCtt < 1:165262/70‑1 (MQ=35) atcatcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTg < 1:405955/71‑1 (MQ=34) atcatcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTT‑AATTTTCa < 1:943302/65‑1 (MQ=255) tcatcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCgtt < 1:289926/45‑1 (MQ=38) tcatcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTg < 1:2295683/70‑1 (MQ=35) catcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAg > 1:2998106/1‑65 (MQ=35) catcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGAt > 1:1242885/1‑71 (MQ=34) catcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGAt > 1:3685802/1‑71 (MQ=34) atcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATc < 1:1826496/71‑1 (MQ=34) tcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCTTTGTTCAGTGTTTCAATTTTCAGCTTGATcc < 1:268789/71‑1 (MQ=21) tcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGtt < 1:2644118/52‑1 (MQ=35) tcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATc > 1:2221347/1‑70 (MQ=35) tcGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATc > 1:4221745/1‑70 (MQ=35) ttGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAtt < 1:1696925/71‑1 (MQ=34) gCGAAAATTTGAGAGACTCACGAGCAACTCTCGTTGTTCAGTGTTTCa < 1:4072732/48‑1 (MQ=255) gCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAttt < 1:2769067/70‑1 (MQ=35) cGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAAtt < 1:563319/50‑1 (MQ=38) gAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCaa < 1:1924643/47‑1 (MQ=38) gAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTa < 1:4591164/71‑1 (MQ=34) gAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTa < 1:5073008/71‑1 (MQ=34) gAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTa < 1:2883818/71‑1 (MQ=34) aaaaTTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTa > 1:802757/1‑70 (MQ=35) aaaTTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTa > 1:149742/1‑69 (MQ=35) tttGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAagag < 1:2109857/71‑1 (MQ=34) gagaCTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAagag > 1:4026012/1‑66 (MQ=35) gaCTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAata < 1:1608917/70‑1 (MQ=35) cTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAttttt < 1:2841911/56‑1 (MQ=35) tCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATAtct > 1:2340207/1‑70 (MQ=35) cACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaa > 1:477326/1‑56 (MQ=35) aCGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTa < 1:467019/54‑1 (MQ=35) aCGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTa < 1:2249978/54‑1 (MQ=35) aCGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCaaa > 1:2331679/1‑63 (MQ=35) aCGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCaa < 1:4316542/71‑1 (MQ=34) aCGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCa > 1:3108669/1‑70 (MQ=35) aCGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCa < 1:4557619/70‑1 (MQ=35) aCGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCa > 1:3001691/1‑70 (MQ=35) cGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGc < 1:4795483/37‑1 (MQ=40) cGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCa < 1:3986288/69‑1 (MQ=35) cGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCa < 1:765135/69‑1 (MQ=35) | CACAACCCGAAGATGTTTCTTTCGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAA > W3110S.gb/3468042‑3468170 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |