New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | W3110S.gb | 4369695 = | 83 (1.630) | 4 (0.080) | 3/98 | NT | 5.3% | coding (28/1698 nt) | dipZ | fused thiol:disulfide interchange protein |
? | W3110S.gb | 4369721 = | 63 (1.290) | coding (2/1698 nt) coding (316/339 nt) |
dipZ cutA |
fused thiol:disulfide interchange protein copper binding protein, copper sensitivity |
AGATTACCTCTCATGGCTCAACGCATCTTTACGCTGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4369734‑4369695 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGAAGTTCCGGGGTTTGATATGGATGAT > W3110S.gb/4369721‑4369789 AGATTACCTCTCATGGCTCAACGCATCTTTACGCTGATC > 1:965387/1‑39 ATGGCTCAACGCATCTTTACGCTGATCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAG < 1:2797531/71‑1 ATGGCTCAACGCATCTTTACGCTGATCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAG < 1:3003551/71‑1 CGCATCTTTACGCTGATCCATGAGAGGTAATCTGTGTCTCCGTGTGTAAC < 1:3104330/50‑1 CATCTTTACGCTGATCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAG > 1:1450923/1‑50 CCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGAAGTTCCGGGGTTTGATATGGATGAT < 1:2867214/71‑1 AGATTACCTCTCATGGCTCAACGCATCTTTACGCTGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/4369734‑4369695 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGAAGTTCCGGGGTTTGATATGGATGAT > W3110S.gb/4369721‑4369789 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |