New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? W3110S.gb 4369695 =83 (1.630)4 (0.080) 3/98 NT 5.3% coding (28/1698 nt) dipZ fused thiol:disulfide interchange protein
?W3110S.gb 4369721 = 63 (1.290)coding (2/1698 nt)
coding (316/339 nt)
dipZ
cutA
fused thiol:disulfide interchange protein
copper binding protein, copper sensitivity

AGATTACCTCTCATGGCTCAACGCATCTTTACGCTGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/4369734‑4369695
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGAAGTTCCGGGGTTTGATATGGATGAT  >  W3110S.gb/4369721‑4369789
                                                                                                             
AGATTACCTCTCATGGCTCAACGCATCTTTACGCTGATC                                                                        >  1:965387/1‑39
            ATGGCTCAACGCATCTTTACGCTGATCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAG                            <  1:2797531/71‑1
            ATGGCTCAACGCATCTTTACGCTGATCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAG                            <  1:3003551/71‑1
                     CGCATCTTTACGCTGATCCATGAGAGGTAATCTGTGTCTCCGTGTGTAAC                                        <  1:3104330/50‑1
                       CATCTTTACGCTGATCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAG                                      >  1:1450923/1‑50
                                      CCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGAAGTTCCGGGGTTTGATATGGATGAT  <  1:2867214/71‑1
                                                                                                             
AGATTACCTCTCATGGCTCAACGCATCTTTACGCTGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/4369734‑4369695
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGAAGTTCCGGGGTTTGATATGGATGAT  >  W3110S.gb/4369721‑4369789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.