| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4369695 = | 83 (1.630) | 4 (0.080) | 3/98 | NT | 5.3% | coding (28/1698 nt) | dipZ | fused thiol:disulfide interchange protein |
| ? | W3110S.gb | 4369721 = | 63 (1.290) | coding (2/1698 nt) coding (316/339 nt) |
dipZ cutA |
fused thiol:disulfide interchange protein copper binding protein, copper sensitivity |
|||||
CGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCA > W3110S.gb/4369626‑4369762 | atcatccatatcaaaccccggaacttctggttttacctgttacacacggagacacagattacctctcatgg < 1:2867214‑M1/2‑1 (MQ=255) gggACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGa > 1:1215943/1‑70 (MQ=255) aCAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAg > 1:4099133/1‑71 (MQ=255) cAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGc > 1:1286445/1‑71 (MQ=255) aaaTTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCg > 1:511164/1‑71 (MQ=255) aTTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAgg < 1:2583796/62‑1 (MQ=255) aTTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGt > 1:842361/1‑70 (MQ=255) tgAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAg < 1:963039/70‑1 (MQ=255) cGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTaaa > 1:2821378/1‑65 (MQ=255) cGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCg > 1:2529474/1‑71 (MQ=255) gTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGt > 1:3618388/1‑71 (MQ=255) cccGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGtt > 1:3190145/1‑70 (MQ=255) cccGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGtt > 1:2169956/1‑70 (MQ=255) cGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAgg < 1:4469699/49‑1 (MQ=255) cGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAgg < 1:227522/49‑1 (MQ=255) cGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCg > 1:2326020/1‑66 (MQ=255) cGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGtt < 1:4526885/68‑1 (MQ=255) cGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGtt < 1:3504171/68‑1 (MQ=255) ggCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAg > 1:1357314/1‑70 (MQ=255) ggCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGc > 1:3848/1‑71 (MQ=255) gcgTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCAt < 1:89924/71‑1 (MQ=255) gcgTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCAt < 1:2341924/71‑1 (MQ=255) ctggttttacctgttacacacggagacacagattacctctcatGGATCAGCGTAAAGATGCGTTGAGCCAt < 1:3003551‑M1/28‑1 (MQ=255) ctggttttacctgttacacacggagacacagattacctctcatGGATCAGCGTAAAGATGCGTTGAGCCAt < 1:2797531‑M1/28‑1 (MQ=255) gTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCAt > 1:697124/1‑69 (MQ=255) gTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATga < 1:411823/71‑1 (MQ=255) tCGAATAATCCGGCAAAAACGGTAGTGCTTCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGcc < 1:2379874/66‑1 (MQ=255) tCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCg < 1:2733894/59‑1 (MQ=255) tCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCg < 1:805622/59‑1 (MQ=255) tCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGcc < 1:4113835/66‑1 (MQ=255) tCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGcc < 1:4069270/66‑1 (MQ=255) tCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag < 1:2783122/71‑1 (MQ=255) cGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATga < 1:3764848/69‑1 (MQ=255) gAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCa > 1:3163329/1‑65 (MQ=255) gAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCa > 1:1760715/1‑65 (MQ=255) gAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGagag > 1:521823/1‑71 (MQ=255) aataatCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGc < 1:1439427/55‑1 (MQ=255) aataatCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATg < 1:1414294/66‑1 (MQ=255) ataatCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCa > 1:294352/1‑63 (MQ=255) taatCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGc > 1:408311/1‑60 (MQ=255) taatCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGt > 1:1313995/1‑70 (MQ=255) taatCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGt > 1:1756037/1‑70 (MQ=255) aatCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCg > 1:2922403/1‑43 (MQ=255) aatCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTaaa > 1:4013840/1‑47 (MQ=255) ctgttacacacggagacacagattacctctcatGGATCAGCGTAAAGATg > 1:1450923‑M1/34‑50 (MQ=255) atCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGAt > 1:856345/1‑37 (MQ=255) atCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGAt > 1:4642229/1‑37 (MQ=255) atCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGa > 1:846331/1‑48 (MQ=255) atCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGa > 1:2401735/1‑48 (MQ=255) atCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGa > 1:3659325/1‑48 (MQ=255) atCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag > 1:3091904/1‑64 (MQ=255) atCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag > 1:3525506/1‑64 (MQ=255) gttacacacggagacacagattacctctcatGGATCAGCGTAAAGATGCg < 1:3104330‑M1/19‑1 (MQ=255) ccGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCt > 1:723685/1‑71 (MQ=255) ccGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCt > 1:2066837/1‑71 (MQ=255) cAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTgtgt > 1:2718074/1‑71 (MQ=255) aaaaaCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgaga > 1:718498/1‑58 (MQ=255) aaaaaCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGagag > 1:996945/1‑59 (MQ=255) aaaaaCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTgtgt > 1:2707359/1‑70 (MQ=255) aaaaaCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTgtgt > 1:2805335/1‑70 (MQ=255) aaaaaCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGtc < 1:3948544/71‑1 (MQ=255) aaaaCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTa < 1:1891396/36‑1 (MQ=255) aaaCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGt < 1:3666368/44‑1 (MQ=255) aaaCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGt < 1:906981/44‑1 (MQ=255) aaaCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGtctc > 1:640579/1‑71 (MQ=255) aaCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTcc > 1:3548389/1‑71 (MQ=255) aCGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCg > 1:4675521/1‑71 (MQ=255) cGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCgt > 1:37256/1‑71 (MQ=255) cGGAACTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCAATGAGAGGTAATCt > 1:3870501/1‑61 (MQ=255) aGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGt < 1:686285/37‑1 (MQ=255) aGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGTTAATCTGTGTCTCCgtgtgt < 1:374744/71‑1 (MQ=255) aGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCgtgtgt < 1:2646680/71‑1 (MQ=255) aGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCgtgtgt < 1:2328888/71‑1 (MQ=255) tgctgcAAAGTAGCAGGATCAGCGTAAAGATGCGtt < 1:1972625/36‑1 (MQ=255) tgctgcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag < 1:3521384/46‑1 (MQ=255) tgctgcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTa < 1:1091894/51‑1 (MQ=255) ctgcAAAGTAGCAGGATCATCGTAAAGATGCGTTGAGCCATGAGAGGTaa < 1:1018168/50‑1 (MQ=255) ctgcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGa > 1:4229445/1‑36 (MQ=255) ctgcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGagag > 1:1732166/1‑46 (MQ=255) ctgcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTcc > 1:1804557/1‑61 (MQ=255) ctgcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAAc < 1:2130805/70‑1 (MQ=255) ctgcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAAc < 1:3616136/70‑1 (MQ=255) ctgcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAAc < 1:4373740/70‑1 (MQ=255) ctgcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAAc < 1:3584231/70‑1 (MQ=255) tgcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCAt < 1:2711794/40‑1 (MQ=255) gcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATga > 1:1016255/1‑41 (MQ=255) gcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATc > 1:35645/1‑50 (MQ=255) gcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCtgtg > 1:4065616/1‑54 (MQ=255) gcAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCtgtg > 1:2839124/1‑54 (MQ=255) cAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTa > 1:3192870/1‑46 (MQ=255) cAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAgg < 1:3800883/70‑1 (MQ=255) cAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAg < 1:4388312/69‑1 (MQ=255) aaGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTaa < 1:3645097/71‑1 (MQ=255) aGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTaaa < 1:3934569/71‑1 (MQ=255) tAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAAc < 1:3552281/71‑1 (MQ=255) gCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAAc > 1:3306172/1‑69 (MQ=255) gCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAAc > 1:1076680/1‑69 (MQ=255) gCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCa < 1:2158561/71‑1 (MQ=255) gCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCa < 1:4130060/71‑1 (MQ=255) | CGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCA > W3110S.gb/4369626‑4369762 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |