| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2764844 = | 65 (1.280) | 4 (0.090) | 3/92 | NT | 7.4% | coding (271/1074 nt) | yfjN | hypothetical protein |
| ? | W3110S.gb | 2764882 = | 41 (0.900) | coding (309/1074 nt) | yfjN | hypothetical protein | |||||
CTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAGCGTTCT > W3110S.gb/2764776‑2764911 | ctatatgcgattcatctgctgatagctcaagtacaggtagaacgcttgtctctacaaatccttgcagtAc < 1:3379320‑M1/2‑1 (MQ=255) tatatgcgattcatctgctgatagctcaagtacaggtagaacgcttgtctctacaaatccttgcagtACCa < 1:1582909‑M1/4‑1 (MQ=255) tACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCa > 1:4182942/1‑71 (MQ=255) tACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCa > 1:1620053/1‑71 (MQ=255) tatgcgattcatctgctgatagctcaagtacaggtagaacgcttgtctctacaaatccttgcagtAcc > 1:2906703‑M1/66‑68 (MQ=255) tatgcgattcatctgctgatagctcaagtacaggtagaacgcttgtctctacaaatccttgcagtAcc > 1:2912414‑M1/66‑68 (MQ=255) tatgcgattcatctgctgatagctcaagtacaggtagaacgcttgtctctacaaatccttgcagtACCAt > 1:831842‑M1/66‑70 (MQ=255) cAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGaaa > 1:3390111/1‑66 (MQ=255) cAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATc < 1:1453885/71‑1 (MQ=255) aaTTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCTTCTTTTTGAAACCATc > 1:3883476/1‑70 (MQ=255) aaTTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATc > 1:1212885/1‑70 (MQ=255) aTTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCaa < 1:3056901/71‑1 (MQ=255) aaTATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCct > 1:61772/1‑71 (MQ=255) atCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATc > 1:2628390/1‑66 (MQ=255) tcACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGaa > 1:1917053/1‑71 (MQ=255) aCTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAtt < 1:3229104/71‑1 (MQ=255) tGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCa < 1:1247063/56‑1 (MQ=255) ggAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAttt > 1:2687464/1‑69 (MQ=255) gAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGa < 1:3583236/70‑1 (MQ=255) ccAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGc < 1:981102/69‑1 (MQ=255) ccAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGAAg > 1:3289483/1‑71 (MQ=255) aaTCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAg > 1:3850862/1‑69 (MQ=255) aTCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCa < 1:1315468/48‑1 (MQ=255) cGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCAt > 1:538433/1‑44 (MQ=255) gTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTaaa < 1:4173568/70‑1 (MQ=255) gTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTaaa < 1:2146623/70‑1 (MQ=255) gTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTaaa > 1:865427/1‑70 (MQ=255) ttCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCctgctg < 1:771685/53‑1 (MQ=255) ttCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAata < 1:4495998/71‑1 (MQ=255) tctcTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAatat > 1:893564/1‑71 (MQ=255) tctcTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAatat > 1:1194044/1‑71 (MQ=255) ctctGGGCCAAGAGTTAGCGGATCATCTTTTTGAACCCATCAATCCTGCTGAATTTGa > 1:501524/1‑58 (MQ=255) ctctGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCa < 1:3953415/39‑1 (MQ=255) ctctGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCa > 1:3069507/1‑42 (MQ=255) tctGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCa < 1:2504876/38‑1 (MQ=255) tctGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAata < 1:4104848/68‑1 (MQ=255) aggtagaacgcttgtctctacaaatccttgcagtACCATCAATCCTGCTGAATTTGAg > 1:3227770‑M1/35‑58 (MQ=255) tGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGc > 1:812464/1‑57 (MQ=255) tGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGc > 1:4569324/1‑57 (MQ=255) tGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTa > 1:1329846/1‑71 (MQ=255) gtagaacgcttgtctctacaaatccttgcagtACCATCAATCCTGCTGAATTTGAGCa < 1:3487541‑M1/26‑1 (MQ=255) ggCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACt > 1:1679388/1‑71 (MQ=255) gCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTg < 1:3774568/51‑1 (MQ=255) gCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTg < 1:378306/51‑1 (MQ=255) gCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTa < 1:4407403/68‑1 (MQ=255) ccAAGAGTTAGCGGATCGTCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGc < 1:3037876/71‑1 (MQ=255) aaGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGc > 1:3122421/1‑69 (MQ=255) agagTTAGCGGATCATCTTTTTGAAACCATCATTCCTGCTGAATTTg > 1:3678291/1‑47 (MQ=255) agagTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAg > 1:3123192/1‑71 (MQ=255) agagTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAg > 1:2442797/1‑71 (MQ=255) agagTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAg > 1:1262959/1‑71 (MQ=255) gagTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAgg < 1:2438733/71‑1 (MQ=255) gagTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAgg < 1:224566/71‑1 (MQ=255) gTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGAt < 1:2212845/71‑1 (MQ=255) aGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAAtt > 1:1366067/1‑39 (MQ=255) aGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGa > 1:2304811/1‑67 (MQ=255) tctacaaatccttgcagtACCATCAATCCTGCTGAATTTGAGCAgg > 1:1919252‑M1/19‑46 (MQ=255) tctacaaatccttgcagtACCATCAATCCTGCTGAATTTGAGCAgg > 1:1200549‑M1/19‑46 (MQ=255) gCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTg < 1:4295122/70‑1 (MQ=255) ggATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTag < 1:1689918/71‑1 (MQ=255) ggATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTac < 1:4654494/71‑2 (MQ=255) gATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGTTAAATATGGTACTGCAAGGATTTGTaga < 1:2716714/71‑1 (MQ=255) gATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAata < 1:1249204/49‑1 (MQ=255) catcTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTaaa < 1:3359313/44‑1 (MQ=255) catcTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATTGTACTGCAAGGATTTGTAgaga > 1:3971027/1‑70 (MQ=255) atcTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGAc < 1:3963231/70‑1 (MQ=255) atcTTTATGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGAt < 1:1934563/60‑1 (MQ=255) tcTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAata > 1:2485818/1‑44 (MQ=255) tcTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAata > 1:4610351/1‑44 (MQ=255) tcTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAata > 1:4472499/1‑44 (MQ=255) cTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAg > 1:1116400/1‑71 (MQ=255) tttttGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAata < 1:3109683/42‑1 (MQ=255) tttttGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGa > 1:2211689/1‑56 (MQ=255) tttttGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTg > 1:2770122/1‑60 (MQ=255) ttttGAAACCATCAATCCTGCTGAACTTGAGCAGGTAAATATTGt > 1:1652424/1‑45 (MQ=255) tttGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAg < 1:3792236/68‑1 (MQ=255) tttGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAGCg < 1:296324/70‑1 (MQ=255) tttGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAGCg < 1:2690413/70‑1 (MQ=255) tttGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAGCGt > 1:2200871/1‑71 (MQ=255) tttGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAGCGt > 1:4413927/1‑71 (MQ=255) gAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTaga < 1:4675775/59‑1 (MQ=255) aaaCCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAGCGTTc < 1:618411/69‑1 (MQ=255) aaaCCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAGCGTTCt < 1:746598/70‑1 (MQ=255) ACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGAc > 1:28382‑M1/1‑59 (MQ=255) | CTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAGCGTTCT > W3110S.gb/2764776‑2764911 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |