| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3210949 | 43 (0.850) | 4 (0.090) | 3/90 | NT | 8.9% | coding (1187/1746 nt) | dnaG | DNA primase |
| ? | W3110S.gb | = 3210964 | 44 (0.980) | coding (1202/1746 nt) | dnaG | DNA primase | |||||
CAAGTTGATCTGAGTACCCCTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAGGCATACTTGAT > W3110S.gb/3210897‑3211031 | cAAGTTGATCTGAGTACCCCTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAagt < 1:4703298‑M2/71‑4 (MQ=255) gTTGATCTGAGTACCCCTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAagtg > 1:3851033‑M2/1‑65 (MQ=255) aGTACCCCTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGa < 1:1089232/68‑1 (MQ=255) tACCCCTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGc < 1:4561190/71‑1 (MQ=255) tACCCCTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGc < 1:2101754/71‑1 (MQ=255) tACCCCTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGc < 1:4355034/71‑1 (MQ=255) ccccTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTg > 1:4543444/1‑71 (MQ=255) cccTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGc > 1:1846101/1‑68 (MQ=255) cccTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGc > 1:1244537/1‑68 (MQ=255) cccTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCAATGATATCGCAa < 1:3574816‑M2/52‑2 (MQ=255) cTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCg > 1:2362602/1‑70 (MQ=255) atGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCg > 1:3967179/2‑70 (MQ=255) aCGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCTGGGCGAAACGCTGCGaa < 1:3561509/69‑1 (MQ=255) aCGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAata > 1:1819139/1‑71 (MQ=255) gcgcgcACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATc < 1:2908358/71‑1 (MQ=255) cgcACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTc < 1:2193034/71‑1 (MQ=255) gcACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCg < 1:1391055/71‑1 (MQ=255) gcACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCg > 1:3688286/1‑71 (MQ=255) gcACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCg > 1:435393/1‑71 (MQ=255) gcACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCCAATATATCTTCg < 1:4540890/71‑1 (MQ=255) cACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGt < 1:3263480/71‑1 (MQ=255) aCGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTc < 1:1326207/71‑1 (MQ=255) gTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGaa > 1:3898955/1‑57 (MQ=255) aGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAAtt < 1:1084843/71‑1 (MQ=255) aGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAAtt < 1:1291825/71‑1 (MQ=255) aGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAAt < 1:3985353/70‑1 (MQ=255) aGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAAt < 1:2476076/70‑1 (MQ=255) tACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGATACGCTGCGAata < 1:2580008/52‑1 (MQ=255) aCGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAgg > 1:873400/1‑71 (MQ=255) cGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAgg > 1:1805172/1‑70 (MQ=255) cTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGcaa > 1:1764022/1‑71 (MQ=255) cTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGcaa > 1:2656797/1‑71 (MQ=255) tGGCACTACCATTGATATCGCAagtgccagcgtactcaaacgtgcgcgcccgtcaggggtactcagatcaa < 1:2248681‑M2/71‑50 (MQ=255) gCACTACCATTGATATCGCAagtgccagcgtactcaaacgtgcgcgcccgtcaggggtactcagatcaa > 1:446608‑M2/1‑20 (MQ=255) gCACTACCATTGATATCGCAagtgccagcgtactcaaacgtgcgcgcccgtcaggggtactcagatcaa > 1:1132871‑M2/1‑20 (MQ=255) aCTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAAt < 1:4655985/71‑1 (MQ=255) aCTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAAt < 1:4539615/71‑1 (MQ=255) aCTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAAt < 1:4388271/71‑1 (MQ=255) cTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAAtt < 1:1542192/71‑1 (MQ=255) tACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAAt > 1:1998827/1‑69 (MQ=255) tACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAAt > 1:4246584/1‑69 (MQ=255) tACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAAt > 1:2921729/1‑69 (MQ=255) aCCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAg > 1:1202920/1‑71 (MQ=255) ccATTGATATCGCAagtgccagcgtactcaaacgtgcgcgcccgtcaggggtactcagatcaacttgcggc > 1:3775669‑M2/1‑14 (MQ=255) ccATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAgg > 1:3102250/1‑71 (MQ=255) aTTGATATCGCAAGTGCCGCGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGcaaca < 1:2590715/62‑1 (MQ=255) ttGATATCGCAAGTGCCGGGCGAAACGCTGCGAatata > 1:4318037/1‑38 (MQ=255) ttGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAAtt < 1:4383776/53‑1 (MQ=255) tGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCt < 1:3383044/40‑1 (MQ=255) tatCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAGGCATACtt > 1:78107/1‑71 (MQ=255) tatCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAGGCATACtt < 1:3631785/71‑1 (MQ=255) tCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAAt < 1:3919054/46‑1 (MQ=255) tCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAAt < 1:3008629/46‑1 (MQ=255) tCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAAt < 1:1263971/46‑1 (MQ=255) tCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAGGCATACTtg < 1:2953192/70‑1 (MQ=255) gCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGcaaca > 1:1128856/1‑53 (MQ=255) gCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAGGCATACTtgat < 1:4166859/70‑1 (MQ=255) gCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAGGCATACTtgat < 1:2536843/70‑1 (MQ=255) gCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAGGCATACTtgat < 1:3186939/70‑1 (MQ=255) | CAAGTTGATCTGAGTACCCCTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAGGCATACTTGAT > W3110S.gb/3210897‑3211031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |