| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 7063 | 64 (1.090) | 18 (0.330) +GATT |
11/94 | NT | 35.2% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | W3110S.gb | = 2564144 | 8 (0.140) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
TACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGA > W3110S.gb/6993‑7131 | tACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAatcatc > 1:299088/1‑71 (MQ=255)tACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAatcatc > 1:2011934/1‑71 (MQ=255) ccGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTgg < 1:1668514/71‑1 (MQ=255) gCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGa > 1:4262930/1‑70 (MQ=255) atatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATccc < 1:2286067/70‑1 (MQ=255) atatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCt > 1:2792305/1‑71 (MQ=255) tatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGAc < 1:2071406/63‑1 (MQ=255) atCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTg > 1:3985202/1‑71 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTg < 1:1321387/70‑1 (MQ=255) aGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgcg < 1:1160601/70‑1 (MQ=255) gCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCt < 1:3667237/71‑1 (MQ=255) gCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCt < 1:2907736/71‑1 (MQ=255) gCATGGCGCTTGCCGTACAGATGAACAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCt < 1:2813451/71‑1 (MQ=255) ggCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGAc > 1:127719/1‑54 (MQ=255) gcgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa < 1:2390726/55‑1 (MQ=255) gcgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg > 1:4360688/1‑70 (MQ=255) gcgcTTGCCGTACAGATGACCAGGGGGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCgg < 1:1608530/71‑1 (MQ=255) cgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGa > 1:121138/1‑71 (MQ=255) cgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGa < 1:823827/71‑1 (MQ=255) gcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGAt < 1:366654/71‑1 (MQ=255) gcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGAt < 1:3514063/71‑1 (MQ=255) gcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGAt < 1:2824725/71‑1 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGcc > 1:412977/1‑63 (MQ=255) gCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCgg < 1:346106/65‑1 (MQ=255) ccGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg < 1:2817483/63‑1 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg < 1:2147522/66‑1 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg < 1:2725014/66‑1 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc > 1:3963986/1‑71 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc < 1:1764158/71‑1 (MQ=255) tACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGc < 1:1694950/71‑1 (MQ=255) cAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGcc < 1:4320091/70‑1 (MQ=255) cAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGcc < 1:3814143/70‑1 (MQ=255) cAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCa < 1:3956999/71‑1 (MQ=255) aGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg < 1:1471947/71‑1 (MQ=255) gATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAg < 1:2281102/70‑1 (MQ=255) aTGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATccca > 1:5309042/1‑44 (MQ=255) aTGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCt > 1:4021752/1‑45 (MQ=255) aTGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGa < 1:2002695/71‑1 (MQ=255) tGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAc < 1:3572473/71‑1 (MQ=255) aCCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCATGAcgc < 1:2220286/71‑1 (MQ=255) cAGGGTGTCGATAAAAATGCCAATCATCTGGACAATcc < 1:2065534/38‑1 (MQ=255) cAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg < 1:2507871/50‑1 (MQ=255) gggTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGa > 1:5265115/1‑50 (MQ=255) gggTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgct > 1:560267/1‑71 (MQ=255) tgtCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgcc < 1:4303847/71‑1 (MQ=255) tCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgc > 1:3106999/1‑71 (MQ=255) cGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgct < 1:1101297/65‑1 (MQ=255) gtgaaaaatgcCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa > 1:960541‑M1/4‑19 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCg < 1:2373167/47‑1 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGccgctgccgctg > 1:658358/1‑71 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGccgctgccgctg < 1:622143/71‑1 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGccgctgccgctg > 1:1832663/1‑71 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaa < 1:2795089‑M1/68‑53 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggca < 1:4368924‑M1/67‑52 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatga < 1:598461‑M1/43‑28 (MQ=255) gaaaaatGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg > 1:3962971‑M1/2‑17 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:4013627‑M1/70‑55 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:4558656‑M1/70‑55 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgt < 1:1286982‑M1/61‑46 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAcgc < 1:2182277/57‑1 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgcc > 1:5227315/1‑64 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGctgccgctgccg > 1:5035376/1‑71 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGctgccgctgccg > 1:3544092/1‑71 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGctgccgctgccg > 1:935533/1‑71 (MQ=255) aaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgta < 1:1194575‑M1/71‑57 (MQ=255) aaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaa > 1:2311685‑M1/1‑15 (MQ=255) aaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCtgccgctgccgc < 1:634888/71‑1 (MQ=255) aaaTGCCAATCATCTGGACAATCCCTTGCGCTGTCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCcgcg < 1:3444570/71‑1 (MQ=255) aaaTGCCAATCATCTGGACAATCCCTTGCGCTGTCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCcgcg < 1:3450546/71‑1 (MQ=255) aaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGTATGCGGAGGCCAGGACGCCGCTGCCGCTGCcgcg < 1:2798623/71‑1 (MQ=255) aaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAgg < 1:3630051/51‑1 (MQ=255) aaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCcgcg < 1:1077032/71‑1 (MQ=255) aaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCcgcg < 1:1686845/71‑1 (MQ=255) aaTGCCAATCATCgcttcttcctgagggaacgact < 1:4245912‑M1/35‑23 (MQ=255) aaTGCCAATCATCgattcttcctgagggaacgact < 1:2245501‑M1/35‑23 (MQ=255) aaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGt < 1:1036437/71‑1 (MQ=255) aaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGt < 1:1618415/71‑1 (MQ=255) aaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGt < 1:2091/71‑1 (MQ=255) aTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGtt < 1:1391689/71‑1 (MQ=255) tGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatc < 1:451429‑M1/71‑61 (MQ=255) tGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtata > 1:3642118‑M1/1‑11 (MQ=255) ccAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcag < 1:2215648‑M1/71‑63 (MQ=255) cAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAgg < 1:4186712/40‑1 (MQ=255) cAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAcgccgc < 1:993125/52‑1 (MQ=255) cAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGc > 1:4322897/1‑71 (MQ=255) aaTCATCgattcttcctgagggaacgacttatgaaactaaagacca < 1:1132805‑M1/46‑40 (MQ=255) aaTCATCgattcttcctgagggaacgacttatgaaactaa < 1:5179534‑M1/40‑34 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtt > 1:835914‑M1/1‑6 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagttt > 1:633975‑M1/1‑5 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatca > 1:3671482‑M1/1‑5 (MQ=255) catcgattcttcctgagggaacgacttaagaaactaaagaccacattgttcggcaat > 1:3130864‑M1/1‑4 (MQ=255) catcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGcc > 1:4833441/1‑38 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:87656‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaa > 1:1104213‑M1/1‑3 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCgctgccgctgcc < 1:4013906/57‑1 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCg > 1:2408276/1‑70 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCg < 1:2251964/70‑1 (MQ=255) tcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGAcgccg > 1:5222151/1‑45 (MQ=255) | TACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGA > W3110S.gb/6993‑7131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |