| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 24616 | 63 (1.080) | 3 (0.060) | 3/94 | NT | 5.4% | coding (2226/2817 nt) | ileS | isoleucyl‑tRNA synthetase |
| ? | W3110S.gb | = 24637 | 48 (0.890) | coding (2247/2817 nt) | ileS | isoleucyl‑tRNA synthetase | |||||
CTCCGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAA > W3110S.gb/24547‑24686 | cTCCGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAgtg > 1:2733633/1‑71 (MQ=255)cTCCGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAgtg < 1:2351806/71‑1 (MQ=255)cTCCGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAgtg < 1:1734003/71‑1 (MQ=255)cTCCGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGT < 1:4549185‑M1/70‑1 (MQ=255) ccGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGtgtg > 1:5293571/1‑71 (MQ=255) cGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACAGCGCCAAAGCGGACAGTGTgg > 1:1965501/1‑71 (MQ=255) cGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTgg > 1:4782278/1‑71 (MQ=255) gTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAgtg < 1:1182452/67‑1 (MQ=255) tGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGgcgc > 1:2296856/1‑71 (MQ=255) gagaTGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGcgcg > 1:5330487/1‑71 (MQ=255) agaTGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGcgt > 1:3482963/1‑71 (MQ=255) aTGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGcgcg < 1:4104721/68‑1 (MQ=255) aTGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGcgtcg < 1:3215268/71‑1 (MQ=255) tGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACGCCGCCAAAGCGGACAGTGTGGCGcgtcg < 1:5258180/70‑1 (MQ=255) tGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGcgtcgt < 1:3099122/71‑1 (MQ=255) gggTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGcgtcg > 1:5369423/1‑69 (MQ=255) ggTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTa < 1:5110339/70‑1 (MQ=255) ggTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAg > 1:1588966/1‑71 (MQ=255) ggTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAg < 1:1934389/71‑1 (MQ=255) gTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGcgcg > 1:1964132/1‑64 (MQ=255) gTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGc > 1:1934700/1‑71 (MQ=255) ttCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCt < 1:2682672/71‑1 (MQ=255) ttCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCt < 1:558804/71‑1 (MQ=255) tCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTg > 1:5003199/1‑71 (MQ=255) tCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTg > 1:1610008/1‑71 (MQ=255) ccTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAg > 1:1451351/1‑67 (MQ=255) ccTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGc > 1:4794364/1‑71 (MQ=255) ccTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGc > 1:395869/1‑71 (MQ=255) ccTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGc > 1:4026089/1‑71 (MQ=255) cTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGc < 1:4593728/70‑1 (MQ=255) ttCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTctggcagctacgacgcgcca > 1:1884238‑M1/1‑51 (MQ=255) cTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTctggcagctacgacgcgcca < 1:1707623‑M1/69‑21 (MQ=255) cTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGc > 1:4118685/1‑64 (MQ=255) cTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCa < 1:1953782/69‑1 (MQ=255) cTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGa < 1:2162368‑M2/71‑2 (MQ=255) aCCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGact < 1:3019842‑M2/71‑4 (MQ=255) ccTCTACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGac > 1:3010414‑M2/1‑67 (MQ=255) cTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTgc < 1:4409227/71‑1 (MQ=255) tCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAgtgt < 1:1994071/46‑1 (MQ=255) gACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTgcgc > 1:2620407/1‑70 (MQ=255) gACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTgcgc > 1:379273/1‑70 (MQ=255) aCATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCTCGTCGTAGCTg < 1:2161236/58‑1 (MQ=255) aCATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCta > 1:5012907/1‑71 (MQ=255) catcatCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCtat < 1:1961450/71‑1 (MQ=255) atcatcAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGcgtcgt > 1:1425562/1‑51 (MQ=255) tcatcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGcgt < 1:5213855/47‑1 (MQ=255) tcatcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCt < 1:3354637/54‑1 (MQ=255) tcatcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTatat < 1:2096523/71‑1 (MQ=255) atcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGc < 1:3743877/51‑1 (MQ=255) atcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTatataa > 1:3827740/1‑69 (MQ=255) atcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATca < 1:2142049/71‑1 (MQ=255) tcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCt < 1:3232938/64‑1 (MQ=255) caAAGACCGACAGTACACCGCCAAAGCGGACAgtg > 1:1420227/1‑35 (MQ=255) aaaGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGGTATATca > 1:395037/1‑68 (MQ=255) aaaGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACAt > 1:2397550/1‑71 (MQ=255) aaGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATc < 1:1032047/71‑1 (MQ=255) aGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCg > 1:4767806/1‑71 (MQ=255) gACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCg > 1:3566513/1‑70 (MQ=255) cGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTGGCTGCCAGACTGCGCTATATCACATCGCAg > 1:1746288/1‑70 (MQ=255) cGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTatat > 1:1938741/1‑60 (MQ=255) cGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAg > 1:2181967/1‑70 (MQ=255) tCAGTACACCGCCAAAGCGGACAGTctggcagctacgacgcgccaca > 1:1015896‑M1/1‑25 (MQ=255) aGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAgcg < 1:4916994/71‑1 (MQ=255) aGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAgcg > 1:880695/1‑71 (MQ=255) aGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAgcg > 1:1029798/1‑71 (MQ=255) gTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAgcgc < 1:4299697/71‑1 (MQ=255) tACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCt < 1:1386426/71‑1 (MQ=255) tACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCt < 1:5048391/71‑1 (MQ=255) cacCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTgg > 1:333176/1‑71 (MQ=255) cacCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTg < 1:5295941/70‑1 (MQ=255) cacCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTg < 1:1375975/70‑1 (MQ=255) cGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTgc > 1:2628061/1‑71 (MQ=255) ccAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTgcgc > 1:4989787/1‑71 (MQ=255) caaaaGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTgcgc > 1:2860991/3‑71 (MQ=255) aaaGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTg < 1:2074726/71‑1 (MQ=255) aGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGa > 1:4118115/1‑71 (MQ=255) ggACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATgg < 1:4149214/71‑1 (MQ=255) ggACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATgg < 1:419556/71‑1 (MQ=255) gACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGc < 1:224085/71‑1 (MQ=255) aCAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCa > 1:637452/1‑71 (MQ=255) aCAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCa > 1:1314520/1‑71 (MQ=255) aGTctggcagctacgacgcgccacactgtccgctttggcggtgtactgacggtctttgatgatgtcgaggt < 1:3019842‑M1/71‑69 (MQ=255) aGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCa < 1:4193578/69‑1 (MQ=255) gTctggcagctacgacgcgccacactgtccgctttggcggtgtactgacggtctttgatgatgtagagg > 1:3010414‑M1/1‑2 (MQ=255) tgtgGCGCGTCGTAGCTGCCAGactgtccgctttggcggtgtactga > 1:1015896‑M2/1‑22 (MQ=255) tgtgGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCaa < 1:487553/71‑1 (MQ=255) tgtgGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCaa < 1:4438170/71‑1 (MQ=255) tgtgGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCaa > 1:2781517/1‑71 (MQ=255) tctggcagctacgacgcgccacactgtccgctttggcggtgtactgacggtctttgatgatgtcgaggtag < 1:2162368‑M1/71‑71 (MQ=255) | CTCCGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAA > W3110S.gb/24547‑24686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |