| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 24616 | 63 (1.080) | 3 (0.060) | 3/94 | NT | 5.4% | coding (2226/2817 nt) | ileS | isoleucyl‑tRNA synthetase |
| ? | W3110S.gb | = 24637 | 48 (0.890) | coding (2247/2817 nt) | ileS | isoleucyl‑tRNA synthetase | |||||
CTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCTGAT > W3110S.gb/24568‑24706 | cTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGa < 1:2162368‑M2/71‑2 (MQ=255) aCCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGact < 1:3019842‑M2/71‑4 (MQ=255) ccTCTACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGac > 1:3010414‑M2/1‑67 (MQ=255) cTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTgc < 1:4409227/71‑1 (MQ=255) gACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTgcgc > 1:2620407/1‑70 (MQ=255) gACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTgcgc > 1:379273/1‑70 (MQ=255) aCATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCta > 1:5012907/1‑71 (MQ=255) catcatCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCtat < 1:1961450/71‑1 (MQ=255) tcatcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTatat < 1:2096523/71‑1 (MQ=255) atcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTatataa > 1:3827740/1‑69 (MQ=255) atcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATca < 1:2142049/71‑1 (MQ=255) tcaAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCt < 1:3232938/64‑1 (MQ=255) aaaGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGGTATATca > 1:395037/1‑68 (MQ=255) aaaGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACAt > 1:2397550/1‑71 (MQ=255) aaGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATc < 1:1032047/71‑1 (MQ=255) aGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCg > 1:4767806/1‑71 (MQ=255) gACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCg > 1:3566513/1‑70 (MQ=255) cGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTGGCTGCCAGACTGCGCTATATCACATCGCAg > 1:1746288/1‑70 (MQ=255) cGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTatat > 1:1938741/1‑60 (MQ=255) cGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAg > 1:2181967/1‑70 (MQ=255) aGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAgcg > 1:1029798/1‑71 (MQ=255) aGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAgcg < 1:4916994/71‑1 (MQ=255) aGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAgcg > 1:880695/1‑71 (MQ=255) gTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAgcgc < 1:4299697/71‑1 (MQ=255) tACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCt < 1:1386426/71‑1 (MQ=255) tACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCt < 1:5048391/71‑1 (MQ=255) cacCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTgg > 1:333176/1‑71 (MQ=255) cacCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTg < 1:1375975/70‑1 (MQ=255) cacCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTg < 1:5295941/70‑1 (MQ=255) cGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTgc > 1:2628061/1‑71 (MQ=255) ccAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTgcgc > 1:4989787/1‑71 (MQ=255) caaaaGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTgcgc > 1:2860991/3‑71 (MQ=255) aaaGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTg < 1:2074726/71‑1 (MQ=255) aGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGa > 1:4118115/1‑71 (MQ=255) ggACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATgg < 1:419556/71‑1 (MQ=255) ggACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATgg < 1:4149214/71‑1 (MQ=255) gACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGc < 1:224085/71‑1 (MQ=255) aCAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCa > 1:637452/1‑71 (MQ=255) aCAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCa > 1:1314520/1‑71 (MQ=255) aGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCa < 1:4193578/69‑1 (MQ=255) tgtgGCGCGTCGTAGCTGCCAGactgtccgctttggcggtgtactga > 1:1015896‑M2/1‑22 (MQ=255) tgtgGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCaa > 1:2781517/1‑71 (MQ=255) tgtgGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCaa < 1:487553/71‑1 (MQ=255) tgtgGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCaa < 1:4438170/71‑1 (MQ=255) tgGCGCGTCGTAGCTGCCAGactgtccgctttggcggtgtactgacggtctttgatgatgtcgaggtagaa > 1:1884238‑M2/1‑20 (MQ=255) tgGCGCGTCGTAGCTGCCAGactgtccgctttggcggtgtactgacggtctttgatgatgtcgaggtag < 1:1707623‑M2/69‑50 (MQ=255) tgGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATc > 1:2135232/1‑71 (MQ=255) tgGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATc > 1:1424743/1‑71 (MQ=255) tgGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATc < 1:1984916/71‑1 (MQ=255) tgGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATc > 1:4758431/1‑71 (MQ=255) gcgTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCctct > 1:1614129/1‑71 (MQ=255) gcgTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCctct > 1:514727/1‑71 (MQ=255) gtcatAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTcc < 1:5329074/71‑1 (MQ=255) gtAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTg < 1:2066825/49‑1 (MQ=255) gtAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCtt < 1:3968426/70‑1 (MQ=255) gtAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCtt > 1:4132662/1‑70 (MQ=255) gtAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCtt > 1:3131273/1‑70 (MQ=255) gCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCAcc < 1:2254393/71‑1 (MQ=255) tGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTcc < 1:2283071/63‑1 (MQ=255) gCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGa < 1:2649524/45‑1 (MQ=255) ccAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCtg < 1:975224/71‑1 (MQ=255) ccAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCtg < 1:3053236/71‑1 (MQ=255) ccAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCtg < 1:2547951/71‑1 (MQ=255) ccAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCt > 1:4319710/1‑70 (MQ=255) ccAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCt > 1:3984410/1‑70 (MQ=255) aGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCtgat > 1:3484983/1‑71 (MQ=255) aGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCtgat > 1:2068039/1‑71 (MQ=255) gACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTgg > 1:1580565/1‑40 (MQ=255) gACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCtgat > 1:1632392/1‑70 (MQ=255) | CTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCTGAT > W3110S.gb/24568‑24706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |