| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4568035 = | 54 (0.920) | 3 (0.060) | 3/88 | NT | 6.4% | coding (359/969 nt) | yjiK | conserved hypothetical protein |
| ? | W3110S.gb | 4568060 = | 41 (0.810) | coding (334/969 nt) | yjiK | conserved hypothetical protein | |||||
TTCGATCGTCTCGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAA > W3110S.gb/4567965‑4568103 | ttCGATCGTCTCGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCAttt < 1:4136060/71‑1 (MQ=255)attgcaggcataacgaataatatctcttcgctgacctggtcgccacaaagcaatactctttttagcactat < 1:5298915‑M1/1‑1 (MQ=255) tCGATCGTCTCGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACGATTGGTGGTCAttt > 1:911167/1‑70 (MQ=255) tgcaggcataacgaataatatctcttcgctgacctggtcggcacaaagcaatactctttttagcactaTc < 1:5280680‑M1/2‑1 (MQ=255) cGATCGTCTCGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTc > 1:1931737/1‑70 (MQ=255) cGATCGTCTCGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTc < 1:1484210/70‑1 (MQ=255) cGATCGACTCGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTc > 1:11292/1‑70 (MQ=255) gcaggcataacgaataatatctcttcgctgacctggtcggcacaaagcaatactctttttagcactaTca > 1:1101971‑M1/68‑70 (MQ=255) gATCGTCTCGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTca > 1:1415864/1‑70 (MQ=255) tCGTCTCGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTcaac > 1:3094851/1‑70 (MQ=255) tctcGAGATCCTTAACAAAATCCAGATGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTcaacaa < 1:499761/69‑1 (MQ=255) tctcGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATg < 1:604942/71‑1 (MQ=255) cGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATggcg > 1:1211432/1‑71 (MQ=255) gagaTCCTTAACAAAATCCAGAGGAATTGTGCGTATAAAATCACCATTGGTGGTCATTTc < 1:5026117/60‑1 (MQ=255) agaTCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATggcggc < 1:1063116/71‑1 (MQ=255) agaTCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATggcgg > 1:2460348/1‑70 (MQ=255) gaTCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATggcgg > 1:1762025/1‑69 (MQ=255) tCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTcaaca < 1:3089913/60‑1 (MQ=255) taatatctcttcgctgacctggtcggcacaaagcaatactctttttagcactat < 1:3120849‑M1/1‑1 (MQ=255) taatatctcttcgctgacctggtcggcacaaagcaatactctttttagcactaTcaaca > 1:2003309‑M1/54‑59 (MQ=255) atatctcttcgctgacctggtcggcacaaagcaatactctttttagcactaTcaacaa < 1:1074956‑M1/7‑1 (MQ=255) tatctcttcgctgacctggtcggcacaaagcaatactctttttagcactaTcaacaa > 1:3175102‑M1/51‑57 (MQ=255) tAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATggc > 1:2830178/1‑61 (MQ=255) tAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTttg > 1:613181/1‑71 (MQ=255) tAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTttg > 1:3401563/1‑71 (MQ=255) tAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTttg > 1:4194929/1‑71 (MQ=255) aaCAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTcaac < 1:40006/54‑1 (MQ=255) aaCAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTcaac > 1:14558/1‑54 (MQ=255) aaCAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGttt < 1:1748379/69‑1 (MQ=255) aaCAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGttt < 1:4217010/69‑1 (MQ=255) aaCAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGttt < 1:1597536/69‑1 (MQ=255) aCAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGt > 1:5372743/1‑66 (MQ=255) aCAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTttgtt > 1:5246343/1‑71 (MQ=255) ctcttcgctgacctggtcggcacaaagcaatactctttttagcactaTca < 1:5355097‑M1/3‑1 (MQ=255) aaaaTCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGa < 1:1028335/71‑1 (MQ=255) cttcgctgacctggtcggcacaaagcaatactctttttagcactaTcaa < 1:2371609‑M1/4‑1 (MQ=255) aaaTCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGa < 1:508895/70‑1 (MQ=255) aaaTCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGa > 1:3718244/1‑70 (MQ=255) ttcgctgacctggtcggcacaaagcaatactctttttagcactaTCAACAATGGCGGCAGGTttgttg > 1:2991617‑M1/45‑68 (MQ=255) ttcgctgacctggtcggcacaaagcaatactctttttagcactaTCAACAATGGCGGCAGGTttgtt > 1:4219653‑M1/45‑67 (MQ=255) aaTCCAGAGGAATTGTGCGGATAATATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGa > 1:4552699/1‑69 (MQ=255) aaTCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGa > 1:4224316/1‑69 (MQ=255) aaTCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGa > 1:415332/1‑69 (MQ=255) aaTCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATa < 1:2528827/71‑1 (MQ=255) aTCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTttg < 1:1122446/64‑1 (MQ=255) tCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATgg > 1:2132292/1‑52 (MQ=255) agagGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCt < 1:4664594/71‑1 (MQ=255) agagGAATTGTGCGGATAAAATCACCATTGGTGGTCATTT‑AACAATGGCGGCAGGTTTGTTGAt < 1:1189097/64‑1 (MQ=255) gagGAATTGTTCGGATAAAATCACCATTGGTGGTCATTTc < 1:973382/40‑1 (MQ=255) agGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTa > 1:3280104/1‑70 (MQ=255) ggAATTGTGCGGATAAAATCACCATTGGTGGTCAttt > 1:492383/1‑37 (MQ=255) ggAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGa > 1:374360/1‑61 (MQ=255) ggAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTaa < 1:1419794/70‑1 (MQ=255) gAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATggc > 1:326435/1‑46 (MQ=255) gAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGttt < 1:2886302/55‑1 (MQ=255) gAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTaaaa < 1:698397/71‑1 (MQ=255) aTTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATa < 1:1320084/60‑1 (MQ=255) gtcggcacaaagcaatactctttttagcactaTCAACAATGGCGGCAGGTttg > 1:3989206‑M1/33‑53 (MQ=255) gATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGt < 1:572510/66‑1 (MQ=255) gATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGt < 1:2395315/66‑1 (MQ=255) gATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTg < 1:2635016/70‑1 (MQ=255) tAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCt < 1:4316683/70‑1 (MQ=255) aaaaTCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAagag < 1:1828711/62‑1 (MQ=255) aaaaTCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAagag < 1:1822603/62‑1 (MQ=255) aaaaTCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCttt > 1:442102/1‑71 (MQ=255) aaaTCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCttt < 1:1552858/70‑1 (MQ=255) aaaTCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTtg < 1:3759951/71‑1 (MQ=255) cACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGcc > 1:1296426/1‑71 (MQ=255) cACCATTGGTGGACATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGcc > 1:1902532/1‑71 (MQ=255) aCCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGcc > 1:1317192/1‑70 (MQ=255) aCCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGcc > 1:949960/1‑70 (MQ=255) ccATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGa > 1:3523563/1‑71 (MQ=255) cATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGAc > 1:5346665/1‑71 (MQ=255) cATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGAc > 1:1539930/1‑71 (MQ=255) ggtggtCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAg < 1:3902314/70‑1 (MQ=255) ggtggtCATTTCAACAATGGCGGCAGGTTTGTTGATAGAGCTAAAAAGAGTATTGCttt > 1:3062450/1‑59 (MQ=255) gtCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCa < 1:808223/70‑1 (MQ=255) gtCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAg > 1:150598/1‑71 (MQ=255) cATTTCAACAATTGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc > 1:4226478/1‑70 (MQ=255) cATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc > 1:4751437/1‑70 (MQ=255) cATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc > 1:1005970/1‑70 (MQ=255) cATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc > 1:730829/1‑70 (MQ=255) aTTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGt < 1:3756316/65‑1 (MQ=255) aTTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCg < 1:3420269/70‑1 (MQ=255) aTTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGCTCAGCg < 1:687214/70‑1 (MQ=255) tttCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGAcc < 1:1670111/60‑1 (MQ=255) tttCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc < 1:4196619/68‑1 (MQ=255) tttCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc < 1:4576469/68‑1 (MQ=255) tttCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGaa < 1:5250207/71‑1 (MQ=255) | TTCGATCGTCTCGAGATCCTTAACAAAATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAA > W3110S.gb/4567965‑4568103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |