| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4568035 = | 54 (0.920) | 3 (0.060) | 3/88 | NT | 6.4% | coding (359/969 nt) | yjiK | conserved hypothetical protein |
| ? | W3110S.gb | 4568060 = | 41 (0.810) | coding (334/969 nt) | yjiK | conserved hypothetical protein | |||||
AATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGATATTATTCGTTATGCCTGCAAT > W3110S.gb/4567991‑4568129 | aaTCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATa < 1:2528827/71‑1 (MQ=255) agagGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCt < 1:4664594/71‑1 (MQ=255) agagGAATTGTGCGGATAAAATCACCATTGGTGGTCATTT‑AACAATGGCGGCAGGTTTGTTGAt < 1:1189097/64‑1 (MQ=255) agGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTa > 1:3280104/1‑70 (MQ=255) ggAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTaa < 1:1419794/70‑1 (MQ=255) gAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTaaaa < 1:698397/71‑1 (MQ=255) aTTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATa < 1:1320084/60‑1 (MQ=255) gATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGt < 1:2395315/66‑1 (MQ=255) gATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGt < 1:572510/66‑1 (MQ=255) gATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTg < 1:2635016/70‑1 (MQ=255) tAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCt < 1:4316683/70‑1 (MQ=255) aaaaTCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAagag < 1:1822603/62‑1 (MQ=255) aaaaTCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAagag < 1:1828711/62‑1 (MQ=255) aaaaTCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCttt > 1:442102/1‑71 (MQ=255) aaaTCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCttt < 1:1552858/70‑1 (MQ=255) aaaTCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTtg < 1:3759951/71‑1 (MQ=255) cACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGcc > 1:1296426/1‑71 (MQ=255) cACCATTGGTGGACATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGcc > 1:1902532/1‑71 (MQ=255) aCCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGcc > 1:949960/1‑70 (MQ=255) aCCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGcc > 1:1317192/1‑70 (MQ=255) ccATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGa > 1:3523563/1‑71 (MQ=255) cATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGAc > 1:1539930/1‑71 (MQ=255) cATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGAc > 1:5346665/1‑71 (MQ=255) ggtggtCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAg < 1:3902314/70‑1 (MQ=255) ggtggtCATTTCAACAATGGCGGCAGGTTTGTTGATAGAGCTAAAAAGAGTATTGCttt > 1:3062450/1‑59 (MQ=255) gtCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCa < 1:808223/70‑1 (MQ=255) gtCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAg > 1:150598/1‑71 (MQ=255) cATTTCAACAATTGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc > 1:4226478/1‑70 (MQ=255) cATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc > 1:730829/1‑70 (MQ=255) cATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc > 1:1005970/1‑70 (MQ=255) cATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc > 1:4751437/1‑70 (MQ=255) aTTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGt < 1:3756316/65‑1 (MQ=255) aTTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCg < 1:3420269/70‑1 (MQ=255) aTTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGCTCAGCg < 1:687214/70‑1 (MQ=255) tttCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGAcc < 1:1670111/60‑1 (MQ=255) tttCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc < 1:4196619/68‑1 (MQ=255) tttCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGc < 1:4576469/68‑1 (MQ=255) tttCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGaa < 1:5250207/71‑1 (MQ=255) caacaaacctgccgccattgttgaTAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGaa > 1:2991617‑M2/25‑68 (MQ=255) CAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGaa < 1:59014‑M1/68‑1 (MQ=255) CAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGaa < 1:478688‑M1/68‑1 (MQ=255) aacaaacctgccgccattgttgaTAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGaa > 1:4219653‑M2/24‑67 (MQ=255) AACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCa > 1:2398713‑M1/1‑62 (MQ=255) AACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAagag > 1:2709232‑M1/1‑70 (MQ=255) caaacctgccgccattgttgaTAGTGCTAAAAAGAGTATTGCTTTGTGCCGAc > 1:3989206‑M2/22‑53 (MQ=255) CAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGata > 1:2618377‑M1/1‑71 (MQ=255) AATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGatat < 1:3438894‑M1/71‑1 (MQ=255) AATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGatat < 1:3434107‑M1/71‑1 (MQ=255) ATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGatat < 1:599588‑M1/70‑1 (MQ=255) tGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGAtatta < 1:5364982/71‑1 (MQ=255) tGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGAtatta < 1:4164914/71‑1 (MQ=255) tGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGAtatt > 1:3690695/1‑70 (MQ=255) gcggcAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGAGCCGACCAGGTCAGCGAAGAGATattatt < 1:4315188/71‑1 (MQ=255) ggcAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGc < 1:2685526/42‑1 (MQ=255) gcAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGATATTATTCGt < 1:5188817/71‑1 (MQ=255) cAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGTGAtatta < 1:4185184/65‑1 (MQ=255) gTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGt < 1:3052975/46‑1 (MQ=255) gTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAgaga < 1:3135951/57‑1 (MQ=255) gTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAgaga < 1:4815502/57‑1 (MQ=255) gTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGAtatta < 1:745092/62‑1 (MQ=255) gTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGAtatta < 1:2726706/62‑1 (MQ=255) gTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGATattatt < 1:4195467/64‑1 (MQ=255) tttGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGAcc < 1:1825508/41‑1 (MQ=255) tttGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAagag < 1:3669852/55‑1 (MQ=255) ttgttgaTAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGatat < 1:1074956‑M2/51‑1 (MQ=255) ttgttgaTAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGata > 1:3175102‑M2/8‑57 (MQ=255) tgttgaTAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGAtatta > 1:2003309‑M2/7‑59 (MQ=255) ttgaTAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAag < 1:2371609‑M2/45‑1 (MQ=255) tgaTAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAagag < 1:5355097‑M2/47‑1 (MQ=255) tgaTAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGATATTATTCGTTATGCCTGc > 1:1101971‑M2/4‑70 (MQ=255) gaTAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGATATTATTCGTTATGCCTGCa < 1:5280680‑M2/68‑1 (MQ=255) aTAGTGCTAAAAAGAGTATTGCTTTGTGGCGACCAGGTCAGCGAAGAGATATTATTCGTTATGCCTGCAAt < 1:5298915‑M2/70‑1 (MQ=255) aTAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGAtatta < 1:3120849‑M2/53‑1 (MQ=255) tAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGatat < 1:113903/51‑1 (MQ=255) tAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGAtatta > 1:3159038/1‑53 (MQ=255) | AATCCAGAGGAATTGTGCGGATAAAATCACCATTGGTGGTCATTTCAACAATGGCGGCAGGTTTGTTGATAGTGCTAAAAAGAGTATTGCTTTGTGCCGACCAGGTCAGCGAAGAGATATTATTCGTTATGCCTGCAAT > W3110S.gb/4567991‑4568129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |