| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 215622 | 36 (0.590) | 38 (1.420) +TTTAATATCAGTAAACCGGACATAACC |
23/44 | NT | 63.0% | coding (732/732 nt) | dnaQ | DNA polymerase III epsilon subunit |
| ? | minE | 2705182 = | 66 (1.080) | intergenic (+106/‑1) | damX/dam | hypothetical protein/DNA adenine methylase | |||||
Only 100 of 136 total aligned reads displayed.
TTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/215555‑215622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > minE/2705182‑2705251 ||||||||||||||||||||||||||| TTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:780184/71‑1TTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:5327773/71‑1TTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:5085450/71‑1 GCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATAT < 1:83823/71‑1 CTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATAT > 1:329608/1‑70 CTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTA < 1:3693455/66‑1 CATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAG > 1:1919760/1‑71 CATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:1061496/63‑1 AAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAA > 1:3243570/1‑71 AAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAA > 1:4022227/1‑61 AAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAA > 1:3856750/1‑61 AAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGACTCTGGCGAGCATAATTTAATATCAGTAAA > 1:979801/1‑71 AGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATAT < 1:4148228/63‑1 TCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:320771/52‑1 TCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:3295950/52‑1 TCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACAT > 1:4801899/1‑70 TCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACAT > 1:1969946/1‑70 GATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATATAATATCAGTAAACCGGACATAAa > 1:2687998/1‑70 ATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:3926570/47‑1 TCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACC > 1:55165/1‑70 TCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACC > 1:4395106/1‑70 TCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACC > 1:2316325/1‑70 TGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCA > 1:142942/1‑70 TGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAT > 1:1631604/1‑42 TGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAT > 1:2668533/1‑42 GGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:10731/43‑1 GTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCaa > 1:2444665/1‑66 GTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCC < 1:1355076/67‑1 GTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCC < 1:722640/67‑1 GTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAG > 1:4343503/1‑50 GCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAATCGGACAT < 1:5682943/60‑1 CAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGA < 1:3928753/71‑1 CAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAG > 1:3568518/1‑70 AGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:2128334/38‑1 AAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAA < 1:3174180/47‑1 AGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAA < 1:1598877/71‑1 AGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:950582/35‑1 GAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAAT < 1:4924503/71‑1 GAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAA < 1:2372254/68‑1 GAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAA < 1:4983833/68‑1 GAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAA > 1:3791332/1‑36 AAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATC < 1:5287619/70‑1 AAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATC > 1:3010393/1‑70 AAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATC > 1:3764070/1‑70 AGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAA > 1:4691417/1‑43 GCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGC > 1:367451/1‑71 GCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCG > 1:1900743/1‑70 GCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAAC > 1:848839/1‑42 AAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTT > 1:1188963/1‑71 AAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTT < 1:2353867/70‑1 AGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTT < 1:404695/71‑1 AGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAAT > 1:2094197/1‑61 GTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTT < 1:1518736/71‑1 GTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAA < 1:2588326/59‑1 GTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGA < 1:5421376/40‑1 TTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG < 1:59707/71‑1 TTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG < 1:566264/71‑1 TTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAA < 1:708440/57‑1 TGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG > 1:5474774/1‑70 CCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAG < 1:3141831/71‑1 CCTCTGGCGAGCATAATTTAATATAAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAG > 1:2964148/1‑71 TCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG < 1:5514171/66‑1 TGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATC < 1:5152564/53‑1 TAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAA < 1:2024014/40‑1 TAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAA < 1:3465635/40‑1 AATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGG < 1:4159238/61‑1 ATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGTTTTTTTG < 1:5437433/53‑1 TATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTT < 1:881042/44‑1 CAGTAAACCGGACATAACCCATGAAGAAAAATCGCG > 1:5230538/1‑36 CAGTAAACCGGACATAACCCATGAAGAAAAATAGCG > 1:2033481/1‑36 AGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGT > 1:2107196/1‑47 AGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGT > 1:1010622/1‑47 AGTAAACCGGACATAACCCATGAAGAAAAATCGCGC < 1:2180517/36‑1 GTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCT > 1:4529039/1‑71 TAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAG > 1:1911333/1‑44 TAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAG > 1:119275/1‑44 TAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTT < 1:3566385/38‑1 TAAACCGGACATAACCCATGAAGAAAAATCGCGCTT > 1:1451749/1‑36 AACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTG < 1:3569759/66‑1 AACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCC > 1:1506791/1‑63 AACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT > 1:4450034/1‑58 AACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG > 1:1656646/1‑57 AACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAG > 1:3204403/1‑42 AACCGGACATAACCCATGAAGAAAAATCGCGCTTT < 1:121268/35‑1 CCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGG > 1:2381737/1‑44 CGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGA > 1:2538632/1‑71 CGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGA > 1:2904753/1‑71 CGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGA < 1:4216931/71‑1 GACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCA > 1:4969594/1‑43 ATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGAT > 1:5284921/1‑64 ATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGAT > 1:4070280/1‑64 ATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT < 1:1578345/50‑1 TAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGAT < 1:3821033/63‑1 AACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAA > 1:2489327/1‑71 AACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAA > 1:1652513/1‑71 AACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTG > 1:4359429/1‑60 ACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA < 1:3255695/69‑1 ACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT > 1:4192837/1‑47 CCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG < 1:3448747/71‑1 CCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATA > 1:1539371/1‑63 ||||||||||||||||||||||||||| TTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/215555‑215622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > minE/2705182‑2705251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |