| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 215622 | 36 (0.590) | 38 (1.420) +TTTAATATCAGTAAACCGGACATAACC |
23/44 | NT | 63.0% | coding (732/732 nt) | dnaQ | DNA polymerase III epsilon subunit |
| ? | minE | 2705182 = | 66 (1.080) | intergenic (+106/‑1) | damX/dam | hypothetical protein/DNA adenine methylase | |||||
Only 100 of 168 total aligned reads displayed.
TTGCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > minE/2705115‑2705251 | ttGCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCAt < 1:4287494/70‑1 (MQ=255)ttGCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATg < 1:3990755/71‑1 (MQ=255) gtgcagaagaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccc < 1:722640‑M2/1‑1 (MQ=255) gtgcagaagaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccc < 1:1355076‑M2/1‑1 (MQ=255) gCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATg > 1:5556928/1‑69 (MQ=255) cagaagaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATgaaga < 1:3928753‑M2/8‑1 (MQ=255) tGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATgaag > 1:5190079/1‑69 (MQ=255) aagaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaaa < 1:3201129‑M2/11‑1 (MQ=255) gcgcTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAAt < 1:2488644/71‑1 (MQ=255) gaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaa < 1:2372254‑M2/10‑1 (MQ=255) gaaaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAAt < 1:4924503‑M2/13‑1 (MQ=255) aaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATc < 1:2738175‑M2/14‑1 (MQ=255) aaggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATc > 1:3010393‑M2/57‑70 (MQ=255) ggcggaagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATcgcg > 1:5281231‑M2/55‑71 (MQ=255) gATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATc < 1:973058/66‑1 (MQ=255) gATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCt < 1:5138857/71‑1 (MQ=255) tGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCttt > 1:3436442/1‑71 (MQ=255) tGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCttt < 1:510667/71‑1 (MQ=255) aagttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCttt < 1:2353867‑M2/21‑1 (MQ=255) agttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCttttt < 1:4136600‑M2/23‑1 (MQ=255) agttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCttttt < 1:404695‑M2/23‑1 (MQ=255) gttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGaaaaa < 1:2588326‑M2/12‑1 (MQ=255) gttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtttttt < 1:1518736‑M2/24‑1 (MQ=255) ttgcctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg < 1:59707‑M2/25‑1 (MQ=255) tCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTg > 1:3709234/1‑70 (MQ=255) tCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGa < 1:2210352/71‑1 (MQ=255) gcctctggcgagcataatttaatatcagtaaaccggacataaccCATgaa > 1:2057842‑M2/45‑50 (MQ=255) cctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAg < 1:3141831‑M2/28‑1 (MQ=255) ctctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGt < 1:4987384‑M2/29‑1 (MQ=255) tctggcgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg < 1:5514171‑M2/25‑1 (MQ=255) cTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATgaaga < 1:1354117/47‑1 (MQ=255) cTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGa < 1:5296112/65‑1 (MQ=255) ttCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:5363976/1‑67 (MQ=255) ttCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:2807256/1‑67 (MQ=255) tctcCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa < 1:2987768/70‑1 (MQ=255) cgagcataatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAg < 1:3420059‑M2/35‑1 (MQ=255) ctcCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa < 1:1019547/69‑1 (MQ=255) ctcCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAg < 1:786051/70‑1 (MQ=255) ccACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCtttttt > 1:5531038/1‑57 (MQ=255) taatttaatatcagtaaaccggacataaccCATGAAGaaa < 1:1893802‑M2/10‑1 (MQ=255) taatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa < 1:1614545‑M2/41‑1 (MQ=255) taatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa < 1:3767856‑M2/41‑1 (MQ=255) caGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc > 1:464496/1‑70 (MQ=255) aatttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTggg < 1:4159238‑M2/32‑1 (MQ=255) gCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCtttt < 1:2470435/50‑1 (MQ=255) atttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGTTTTTTTg < 1:5437433‑M2/25‑1 (MQ=255) atttaatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAg < 1:3485352‑M2/43‑1 (MQ=255) taatatcagtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTa < 1:5380637‑M2/45‑1 (MQ=255) gagaAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa < 1:4834242/58‑1 (MQ=255) tatcagtaaaccggacataaccCATGAAGAAAAATCGCGCtttt < 1:881042‑M2/22‑1 (MQ=255) gaAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCttt < 1:3603606/43‑1 (MQ=255) ggTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGaa > 1:1646972/1‑46 (MQ=255) cagtaaaccggacataaccCATGAAGAAAAATagcg > 1:2033481‑M2/20‑36 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCgcgc < 1:2180517‑M2/18‑1 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGt > 1:4215473‑M2/19‑47 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGt > 1:1010622‑M2/19‑47 (MQ=255) agtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGt > 1:2107196‑M2/19‑47 (MQ=255) gtaaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCt > 1:4529039‑M2/18‑71 (MQ=255) taaaccggacataaccCATGAAGAAAAATCGCGCtttt < 1:3566385‑M2/22‑1 (MQ=255) taaaccggacataaccCATGAAGAAAAATCGCGCtt > 1:1451749‑M2/17‑36 (MQ=255) taaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAg > 1:632425‑M2/17‑44 (MQ=255) taaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAg > 1:1911333‑M2/17‑44 (MQ=255) taaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAg > 1:119275‑M2/17‑44 (MQ=255) taaaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCtt < 1:4024166‑M2/55‑1 (MQ=255) gtAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGt > 1:4704004/1‑45 (MQ=255) tAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTgg < 1:2301482/46‑1 (MQ=255) tAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTgg < 1:796348/46‑1 (MQ=255) aaccggacataaccCATGAAGAAAAATCGCGCttt < 1:121268‑M2/21‑1 (MQ=255) aaccggacataaccCATGAAGAAAAATCGCGCTTTTTTg < 1:4857888‑M2/25‑1 (MQ=255) aaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAg > 1:1656646‑M2/15‑57 (MQ=255) aaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGt > 1:4450034‑M2/15‑58 (MQ=255) aaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATccc > 1:5611391‑M2/15‑63 (MQ=255) aaccggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:3569759‑M2/52‑1 (MQ=255) aaTTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAg > 1:4396993/1‑49 (MQ=255) aTTAGTTAGTCAGCATGAAGAAAAATCGCGCttttttt < 1:3797027/38‑2 (MQ=255) aTTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTg < 1:2400671/38‑1 (MQ=255) aTTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGTGGCAAGTATCCCCTGCTtgat < 1:1212900/71‑1 (MQ=255) aTTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgat > 1:4375014/1‑71 (MQ=255) aTTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgat > 1:368820/1‑71 (MQ=255) cggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgatga > 1:2904753‑M2/12‑71 (MQ=255) cggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgatga > 1:2538632‑M2/12‑71 (MQ=255) cggacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgatga < 1:4216931‑M2/60‑1 (MQ=255) agttagtCAGCATGAAGAAAAATCGCGCTTTTTTGaa > 1:283706/1‑37 (MQ=255) gttagtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCa < 1:1312829/50‑1 (MQ=255) gacataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa > 1:4969594‑M2/10‑43 (MQ=255) ttagtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCaa < 1:2276633/50‑1 (MQ=255) ttagtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCaa < 1:2627215/50‑1 (MQ=255) ataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGt < 1:1578345‑M2/44‑1 (MQ=255) ataaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgat > 1:5284921‑M2/7‑64 (MQ=255) taaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtgat < 1:3821033‑M2/58‑1 (MQ=255) gtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCaa < 1:4603778/47‑1 (MQ=255) gtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTaa < 1:565733/71‑1 (MQ=255) aaccCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTtg > 1:4359429‑M2/5‑60 (MQ=255) accCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGt > 1:4192837‑M2/4‑47 (MQ=255) accCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTaa < 1:3255695‑M2/66‑1 (MQ=255) aGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGt > 1:63080/1‑46 (MQ=255) aGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTaa > 1:1825526/1‑68 (MQ=255) aGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAAc < 1:31078/70‑1 (MQ=255) cCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGata > 1:1539371‑M2/2‑63 (MQ=255) cCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACgg < 1:3448747‑M2/70‑1 (MQ=255) | TTGCCTGAAGCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > minE/2705115‑2705251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |