| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2561070 | 60 (0.980) | 5 (0.100) | 3/84 | NT | 8.4% | coding (579/1191 nt) | lldD | L‑lactate dehydrogenase, FMN‑linked |
| ? | minE | = 2561082 | 58 (1.110) | coding (567/1191 nt) | lldD | L‑lactate dehydrogenase, FMN‑linked | |||||
TCCAGTCCGGTCGGTTTGCCGAGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2560996‑2561070‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacatccGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATCTCAGCTTATCTCGG < minE/2561082‑2561014 TCCAGTCCGGTCGGTTTGCCGAGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCA > 1:2676970/1‑70 CCAGTCCGGTCGGTTTGCCGAGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCC < 1:1281364/68‑1 CAGTCCGGTCGGTTTGCCGAGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACAT < 1:84560/71‑1 AGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCA > 1:639922/1‑49 AGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCACACATCCGCAATGGGCGTG < 1:4238988/66‑1 AGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCACACATCCGCAATGGGCGTG < 1:4408793/66‑1 AGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCACACATCCGCAATGGGCGTG < 1:3610718/66‑1 TATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCGCAATGGGCGTGGGATGT < 1:3264553/59‑1 TATTACCTAAATCATGCGGACGACCGTTCAGGCCCACATC < 1:942526/40‑1 TATTACCTAAATCATGCGGACGACCGTTCAGGCCCACATC < 1:141905/40‑1 TATTACCTAAATCATGCGGACGACCGTTCAGGCCCACATC < 1:753649/40‑1 TATTACCTAAATCATGCGGACGACCGTTCAGGCCCACATC < 1:4619421/40‑1 TTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCGCAATGGGCGTGGGATGTG > 1:661680/1‑58 TTACCTAAATCATGTGGACGACCGTTCAGGCCCACA > 1:2182879/1‑36 TTACCTAAATCATGTGGACGACCGTTCAGGCCCACA > 1:2681090/1‑36 TTACCTAAATCATGTGGACGACCGTTCAGGCCCACA > 1:5232919/1‑36 TTACCTAAATCATGTGGACGACCGTTCAGGCCCAC > 1:3803932/1‑35 TTACCTAAATCATGTGGACGACCGTTCAGGCCCAC > 1:4670871/1‑35 TTACCTAAATCATGTGGACGACCGCTCAGGCCCACA > 1:4559334/1‑36 TTACCTAAATCATGTGGACGACCGCTCAGGCCCACA > 1:4565789/1‑36 CATCCGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATCTCAGCTTATCT < 1:1126565/71‑1 CATCCGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATCTCAGCTTATC < 1:2145594/70‑1 ATCCGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATCTCAGCTTATCTC > 1:5628984/1‑71 TCCGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATC < 1:2967356/58‑1 TCCGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATC < 1:3316675/58‑1 CCGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATC < 1:4383145/57‑1 CCGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGG < 1:3622407/50‑1 CCGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGG < 1:4224440/50‑1 CGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATCTCAGCTTATCTCGG > 1:4964167/1‑70 TCCAGTCCGGTCGGTTTGCCGAGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2560996‑2561070‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacatccGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATCTCAGCTTATCTCGG < minE/2561082‑2561014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |