| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2561070 | 60 (0.980) | 5 (0.100) | 3/84 | NT | 8.4% | coding (579/1191 nt) | lldD | L‑lactate dehydrogenase, FMN‑linked |
| ? | minE | = 2561082 | 58 (1.110) | coding (567/1191 nt) | lldD | L‑lactate dehydrogenase, FMN‑linked | |||||
TGCCGAGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTGAATGCGCATCA > minE/2561012‑2561151 | tGCCGAGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGc > 1:4329864/1‑71 (MQ=255) ccGAGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCg > 1:4964167‑M2/1‑69 (MQ=255) gagaTAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCggat > 1:5628984‑M2/1‑67 (MQ=255) agaTAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCggatg < 1:1126565‑M2/71‑6 (MQ=255) gaTAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCggatg < 1:2145594‑M2/70‑6 (MQ=255) aaGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATgtgt > 1:2275276/1‑70 (MQ=255) aaGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATgtgt > 1:1787128/1‑70 (MQ=255) tGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCg > 1:3313805/1‑71 (MQ=255) tGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCg > 1:3320632/1‑71 (MQ=255) agaTATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCt > 1:4961256/1‑71 (MQ=255) gaTATTACCTAAATCATGTGGACGACCGTTCATGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCtt > 1:4951360/1‑71 (MQ=255) gaTATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGc > 1:4275409/1‑55 (MQ=255) gaTATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGc > 1:2541300/1‑55 (MQ=255) gaTATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCgga < 1:2967356‑M2/58‑4 (MQ=255) gaTATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCgga < 1:3316675‑M2/58‑4 (MQ=255) gaTATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCgg < 1:4383145‑M2/57‑3 (MQ=255) tatTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGc < 1:5294152/71‑1 (MQ=255) tatTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGc < 1:2596361/71‑1 (MQ=255) atTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATgtgt > 1:5418609/1‑60 (MQ=255) atTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATgtgt > 1:4045771/1‑60 (MQ=255) atTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATgtgt > 1:5424984/1‑60 (MQ=255) atTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGc < 1:1396268/70‑1 (MQ=255) aCCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAg > 1:3262382/1‑70 (MQ=255) ccTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCgg < 1:3622407‑M2/50‑3 (MQ=255) ccTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCgg < 1:4224440‑M2/50‑3 (MQ=255) cTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAg > 1:5553308/1‑71 (MQ=255) aaaTCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAgcg > 1:3654958/1‑71 (MQ=255) aaTCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAgc < 1:5158952/69‑1 (MQ=255) aaTCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAgc < 1:118514/69‑1 (MQ=255) cATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCa < 1:1334089/51‑1 (MQ=255) aTGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCa > 1:5669743/1‑71 (MQ=255) tgtgGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAgcg < 1:5511965/65‑1 (MQ=255) tgGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTg > 1:143413/1‑71 (MQ=255) tgGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCCTGCAAGTAGCGGCGCATTg > 1:410720/1‑71 (MQ=255) gacgacCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCAACGCTTGCAAGTAGCGGCGCATTGcc > 1:4126896/1‑71 (MQ=255) cgacCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCcgc < 1:5137377/71‑1 (MQ=255) gacCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCcgcg < 1:2438183/71‑1 (MQ=255) cGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCaa > 1:720068/1‑49 (MQ=255) cGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCaa > 1:1944203/1‑49 (MQ=255) ttCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCgg < 1:4755738/71‑1 (MQ=255) tCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGc > 1:4475724/1‑61 (MQ=255) tCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGc > 1:876517/1‑61 (MQ=255) tCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCggg > 1:4265864/1‑71 (MQ=255) cAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCAt > 1:4851173/1‑57 (MQ=255) cAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCggg > 1:923024/1‑70 (MQ=255) cAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGc > 1:1139640/1‑71 (MQ=255) cAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGc > 1:473325/1‑71 (MQ=255) cccACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAg < 1:39355/42‑1 (MQ=255) cccACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAg < 1:2257680/42‑1 (MQ=255) cccACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAg < 1:2261992/42‑1 (MQ=255) cccACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCt < 1:1414505/71‑1 (MQ=255) cccACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCt < 1:4421816/71‑1 (MQ=255) ccACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCt > 1:1983349/1‑70 (MQ=255) cacaTCCCACGCCCATTGCggatgtgggcctgaacggtcgtccacatgatttaggtaa > 1:661680‑M2/1‑19 (MQ=255) cacaTCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCa < 1:2689622/71‑1 (MQ=255) cacaTCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCa < 1:4858016/71‑1 (MQ=255) cacaTCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCa < 1:2978798/71‑1 (MQ=255) cacaTCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCa < 1:5322784/71‑1 (MQ=255) cacaTCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCa < 1:3153001/71‑1 (MQ=255) acaTCCCACGCCCATTGCggatgtgggcctgaacggtcgtccacatgatttaggtaata < 1:3264553‑M2/59‑42 (MQ=255) acaTCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAg < 1:2446651/39‑1 (MQ=255) acaTCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCa > 1:3096280/1‑70 (MQ=255) caTCCCACGCCCATTGCGGATGTGTCACCGCTTGc < 1:5568378/35‑1 (MQ=255) caTCCCACGCCCATTGCGGATGTGTCACCGCTTGc < 1:5439630/35‑1 (MQ=255) caTCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATa < 1:5319470/71‑1 (MQ=255) aTCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATAc < 1:4244730/71‑1 (MQ=255) tCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATAcc > 1:2847622/1‑71 (MQ=255) cccACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCt > 1:3736357/1‑71 (MQ=255) cccACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCt > 1:3969158/1‑71 (MQ=255) ccACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTg < 1:728640/71‑1 (MQ=255) ccACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTg < 1:3754134/71‑1 (MQ=255) ccACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTg < 1:4396040/71‑1 (MQ=255) cACGCCCATTGCggatgtgtgcctgaacggtcgtccacatgatttaggtaatatctcagcttatct < 1:4238988‑M2/66‑55 (MQ=255) cACGCCCATTGCggatgtgtgcctgaacggtcgtccacatgatttaggtaatatctcagcttatct < 1:3610718‑M2/66‑55 (MQ=255) cACGCCCATTGCggatgtgtgcctgaacggtcgtccacatgatttaggtaatatctcagcttatct < 1:4408793‑M2/66‑55 (MQ=255) cACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCTTACCTGa < 1:1269992/71‑1 (MQ=255) gCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATAcc < 1:2425601/65‑1 (MQ=255) ccATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTGAATgcg < 1:2678479/71‑1 (MQ=255) cATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCt < 1:2742759/56‑1 (MQ=255) cATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCt < 1:1622967/56‑1 (MQ=255) cATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTGAATgcgc < 1:3250472/71‑1 (MQ=255) aTTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGc > 1:3485671/1‑54 (MQ=255) aTTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGc > 1:8347/1‑54 (MQ=255) aTTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTGAATGCGCa > 1:104712/1‑71 (MQ=255) ttGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCa > 1:78908/1‑35 (MQ=255) ttGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTGAATgc < 1:1017290/67‑1 (MQ=255) tGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTGaa > 1:2504430/1‑63 (MQ=255) gCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTg > 1:2225794/1‑36 (MQ=255) gCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATAcc > 1:3439743/1‑58 (MQ=255) gCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTGAATGCGCATCa > 1:4133720/1‑71 (MQ=255) | TGCCGAGATAAGCTGAGATATTACCTAAATCATGTGGACGACCGTTCAGGCCCACATCCCACGCCCATTGCGGATGTGTCACCGCTTGCAAGTAGCGGCGCATTGCCGCGTTCGGGCCGCTCATACCTGAATGCGCATCA > minE/2561012‑2561151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |