| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 937260 = | 43 (0.700) | 13 (0.230) +GAT |
6/92 | NT | 18.9% | intergenic (+166/+241) | fdnI/yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/predicted DNA‑binding transcriptional regulator |
| ? | minE | 1716817 = | 76 (1.240) | intergenic (+75/+123) | yphH/glyA | predicted DNA‑binding transcriptional regulator/serine hydroxymethyltransferase | |||||
ACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTA > minE/937190‑937330 | acgccttatccggcctacaaaacagtgcaaattcaatatattgcaatcttctgtaggcctgataagcatcg < 1:2714889‑M1/1‑1 (MQ=255) tatccggcctacaaaacagtgcaaattcaatatattgcaatcttctggtaggcctgataagcatcGCGCAt < 1:276209‑M1/6‑1 (MQ=255) tatccggcctacaaaacagtgcaaattcaatatattgcaatcttctggtaggcctgataagcatcGCGCAt < 1:5482606‑M1/6‑1 (MQ=255) caaaacagtgcaaattcaatatattgcaatcttctggtaggcctgataagcatcGCGCa < 1:303370‑M1/5‑1 (MQ=255) caaaacagtgcaaattcaatatattgcaatcttctggtaggcctgataagcatcGCGCa < 1:5484282‑M1/5‑1 (MQ=255) caaaacagtgcaaattcaatatattgcaatcttctggtaggcctgataagcatcGCGCATCAggcaagct < 1:334856‑M1/16‑4 (MQ=255) caaaacagtgcaaattcaatatattgcaatcttctggtaggcctgataagcatcGCGCATCAggcaagct < 1:345139‑M1/16‑4 (MQ=255) caaaacagtgcaaattcaatatattgcaatcttctggtaggcctgataagcatcGCGCATCAGgcaagc > 1:100149‑M1/55‑67 (MQ=255) caaattcaatatattgcaatcttctggtaggcctgataagcatcGCGCATCAggcaagct > 1:4318637‑M1/45‑57 (MQ=255) tatattgcaatcttctggtaggcctgataagcatcGCGCATCAGGc > 1:3719605‑M1/36‑46 (MQ=255) tatattgcaatcttctggtaggcctgataagcatcGCGCATCAGGc > 1:24882‑M1/36‑46 (MQ=255) tAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa < 1:479822/71‑1 (MQ=34) tAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa < 1:4768310/71‑1 (MQ=34) tAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa < 1:4624653/71‑1 (MQ=34) tAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa < 1:1393471/71‑1 (MQ=34) aGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa > 1:5582951/1‑70 (MQ=35) aGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa > 1:2826502/1‑70 (MQ=35) tattgcaatcttctggtaggcctgataagcatcgcg > 1:4175209‑M1/34‑36 (MQ=255) tattgcaatcttctggtaggcctgataagcatcGCGCATCAGGCaa < 1:829910‑M1/13‑1 (MQ=255) gATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCaaa < 1:3841194/71‑1 (MQ=38) tgcaatcttctggtaggcctgataagcatcGCGCAt > 1:4517591‑M1/31‑36 (MQ=255) tGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATgg > 1:2299253/1‑71 (MQ=39) cAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGG‑AATGTTGCGTTTGTCATCAGTTTCAAATGgcgc > 1:3550349/1‑71 (MQ=255) gTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCt > 1:113315/1‑71 (MQ=39) tGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTg > 1:5172446/1‑71 (MQ=40) tGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTg < 1:1363108/71‑1 (MQ=40) tGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTg > 1:3811141/1‑71 (MQ=40) gAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGgc > 1:942746/1‑66 (MQ=40) aCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaa < 1:5469562/71‑1 (MQ=255) aCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaa < 1:3860878/71‑1 (MQ=255) aCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaa < 1:4560106/71‑1 (MQ=255) cGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaa < 1:3212330/71‑1 (MQ=255) cGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaa < 1:1515659/71‑1 (MQ=255) gtgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaa < 1:388914/70‑1 (MQ=255) gtgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaa < 1:3192773/69‑1 (MQ=255) gtgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaa < 1:2696843/69‑1 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaa < 1:1135617/64‑1 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGc > 1:2433991/1‑69 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGAGt > 1:2139704/1‑71 (MQ=255) cctgataagcatcGCGCATCAGGCAAGCTTACATTTGtcatc > 1:2904041‑M1/14‑42 (MQ=255) cctgataagcatcGCGCATCAGGCAAGCTTACATTTGTCATCAg < 1:3141518‑M1/31‑1 (MQ=255) cctgataagcatcGCGCATCAGGCAAGCTTACATTTGTCATCAg < 1:4414518‑M1/31‑1 (MQ=255) cTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAt > 1:1969339/1‑71 (MQ=255) cTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAt < 1:3883592/71‑1 (MQ=255) tGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa < 1:5390247/47‑1 (MQ=38) tGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa < 1:1116631/47‑1 (MQ=38) tGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGc < 1:4169082/65‑1 (MQ=255) gATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAg < 1:3388873/62‑1 (MQ=255) aTAAGCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCaaac > 1:2459020/1‑47 (MQ=11) aTAAGCGTAGCGCATCAGGCATTTTTGCGGTTGCCATCAGTTTCaaac > 1:1400852/1‑47 (MQ=11) aTAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc > 1:2668396/1‑44 (MQ=35) aTAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc > 1:2700072/1‑44 (MQ=35) aTAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc > 1:3570097/1‑44 (MQ=35) aTAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAttt > 1:3456772/1‑70 (MQ=255) tAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAtttt > 1:2265126/1‑70 (MQ=255) aaGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCa > 1:5166507/1‑71 (MQ=255) aGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGttt > 1:4299917/1‑40 (MQ=33) aGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGttt > 1:3786969/1‑40 (MQ=33) aGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGttt > 1:731236/1‑40 (MQ=33) aGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCa > 1:662472/1‑70 (MQ=255) gCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCata < 1:2828332/71‑1 (MQ=255) tAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCt > 1:3594103/1‑47 (MQ=255) tAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCt > 1:4744063/1‑47 (MQ=255) tAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCt > 1:5668540/1‑47 (MQ=255) gcgcATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGt < 1:2137548/70‑1 (MQ=255) gcgcATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGt < 1:1404594/70‑1 (MQ=255) gcgcATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTa < 1:4389785/71‑1 (MQ=255) gcgcATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTa < 1:3320061/71‑1 (MQ=255) | ACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTA > minE/937190‑937330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |