| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1165287 = | 99 (1.610) | 8 (0.150) | 4/84 | NT | 10.4% | coding (340/1491 nt) | ynjC | fused transporter subunits and membrane component of ABC superfamily |
| ? | minE | 1165306 = | 53 (1.010) | coding (359/1491 nt) | ynjC | fused transporter subunits and membrane component of ABC superfamily | |||||
Only 100 of 148 total aligned reads displayed.
AGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAG > minE/1165218‑1165356 | aGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGa > 1:918323/1‑71 (MQ=255) cgctcaatactgctgctaagatccacagcagaaatgcgctttctttcactgcaagggtgaggcccaGAcc > 1:1167949‑M1/67‑70 (MQ=255) cccTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGa > 1:2400200/1‑71 (MQ=255) cTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATgg < 1:2423003/64‑1 (MQ=255) caatactgctgctaagatccacagcagaaatgcgctttctttcactgcaagggtgaggcccaGa < 1:3930659‑M1/2‑1 (MQ=255) tCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGAc > 1:3803966/1‑64 (MQ=255) tCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGAc > 1:1766292/1‑64 (MQ=255) tCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGa > 1:3504308/1‑67 (MQ=255) tCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGAttt < 1:1953009/70‑1 (MQ=255) tCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTg > 1:317470/1‑71 (MQ=255) tCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTg > 1:5521482/1‑71 (MQ=255) cTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGAttt < 1:4024709/69‑1 (MQ=255) cTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGAtt > 1:2050004/1‑68 (MQ=255) cTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTgg > 1:5356864/1‑71 (MQ=255) cTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTgg > 1:3711547/1‑71 (MQ=255) tactgctgctaaggtccacagcagaaatgcgctttctttcactgcaagggtgaggcccaGACCg < 1:399458‑M1/5‑1 (MQ=255) ctctTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTgg < 1:4746895/68‑1 (MQ=255) tttGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCgg > 1:4203168/1‑71 (MQ=255) ttGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGAtt > 1:2500854/1‑61 (MQ=255) ttGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGt > 1:2345925/1‑71 (MQ=255) tGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGt < 1:4051753/70‑1 (MQ=255) tGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTc > 1:464021/1‑71 (MQ=255) tGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTc > 1:5191593/1‑71 (MQ=255) tGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTc > 1:3844098/1‑71 (MQ=255) cTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCt < 1:4371635/70‑1 (MQ=255) cTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCt < 1:4825572/70‑1 (MQ=255) tGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCg < 1:3919755/54‑1 (MQ=255) tGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCg < 1:305345/54‑1 (MQ=255) agatccacagcagaaatgcgctttctttcactgcaagggtgaggcccaGACCGATTTGGCATCGGt < 1:1303798‑M1/18‑1 (MQ=255) aCGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCa < 1:524011/60‑1 (MQ=255) aCGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTACGCCAATGGACCGATTTGGCATCGGTCTGGGc < 1:5581773/71‑1 (MQ=255) cGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGcc < 1:2395807/71‑1 (MQ=255) atccacagcagaaatgcgctttctttcactgcaagggtgaggcccaGACCGa < 1:4956084‑M1/6‑1 (MQ=255) atccacagcagaaatgcgctttctttcactgcaagggtgaggcccaGACCGa < 1:5194348‑M1/6‑1 (MQ=255) gAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTggg > 1:765195/1‑67 (MQ=255) gAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTggg > 1:1716919/1‑67 (MQ=255) cacagcagaaatgcgctttctttcactgcaagggtgaggcccaGACCg > 1:5164055‑M1/44‑48 (MQ=255) aGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCa > 1:2539190/1‑71 (MQ=255) agcagaaatgcgctttctttcactgcaagggtgaggcccaGACCg < 1:3568056‑M1/5‑1 (MQ=255) ctgctTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCa > 1:4231021/1‑52 (MQ=255) ctgctTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCt > 1:826431/1‑71 (MQ=255) tgctTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGAt < 1:2304024/45‑1 (MQ=255) tgctTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGAt < 1:4976995/45‑1 (MQ=255) tgctTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCtt > 1:417561/1‑71 (MQ=255) ctTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGa < 1:4290368/42‑1 (MQ=255) tttATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCAt < 1:2350834/49‑1 (MQ=255) tttATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTg > 1:1436284/1‑69 (MQ=255) tttATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTg > 1:2008095/1‑69 (MQ=255) ttATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCAt < 1:5032786/48‑1 (MQ=255) ttATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCa > 1:2636532/1‑62 (MQ=255) tATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGAtt > 1:342344/1‑41 (MQ=255) tGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCAt > 1:314675/1‑45 (MQ=255) tGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTga < 1:5326341/71‑1 (MQ=255) gACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTga < 1:2965722/70‑1 (MQ=255) cTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCt > 1:166448/1‑48 (MQ=255) cTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGTCCTCACCCTTGCAGTgaaag < 1:2070020/71‑1 (MQ=255) tttCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCgg < 1:2008487/42‑1 (MQ=255) tttCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCtt < 1:1591734/58‑1 (MQ=255) tttCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTgaaagaaa < 1:3482239/71‑1 (MQ=255) tttCCCGTATTTCACTCCGCCAATGGACCGATTTGGCAGCGGTCTGGGCCTCACCCTTGCAGTgaaagaa < 1:543478/70‑1 (MQ=255) ttCCCGTATTTCACTCCGCCAATGGACCGATTTGGCa > 1:5477399/1‑37 (MQ=255) ttCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCt > 1:2273637/1‑44 (MQ=255) ttCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTg > 1:2625524/1‑45 (MQ=255) ttCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTg > 1:432368/1‑45 (MQ=255) ttCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTg > 1:4493334/1‑45 (MQ=255) tttcactgcaagggtgaggcccaGACCGATTTGGCATc > 1:2575046‑M1/24‑38 (MQ=255) tCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGt > 1:475208/1‑41 (MQ=255) cccGTATTTCACTCCGCCAATGGACCGATTTGGCAt > 1:4705302/1‑36 (MQ=255) cccGTATTTCACTCCGCCAATGGACCGATTTGGCAt > 1:681932/1‑36 (MQ=255) tcactgcaagggtgaggcccaGACCGATTTGGCATCgg < 1:1291798‑M1/17‑1 (MQ=255) tcactgcaagggtgaggcccaGACCGATTTGGCATCgg < 1:704653‑M1/17‑1 (MQ=255) tcactgcaagggtgaggcccaGACCGATTTGGCATCgg < 1:255476‑M1/17‑1 (MQ=255) gTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCa > 1:3056922/1‑47 (MQ=255) gTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCa > 1:81692/1‑47 (MQ=255) tATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCt > 1:2881782/1‑50 (MQ=255) tttCACTCCGCCAATGGACCGATTTGGCATCGGTCTg > 1:4692659/1‑37 (MQ=255) tttCACTCCGCCAATGGACCGATTTGGCATCGGTCTg > 1:2808122/1‑37 (MQ=255) tttCACTCCGCCAATGGACCGATTTGGCATCGGTCTg > 1:2979175/1‑37 (MQ=255) tttCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTc > 1:858969/1‑71 (MQ=255) tttCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTc > 1:5672446/1‑71 (MQ=255) ttCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCAtt < 1:3588847/68‑1 (MQ=255) tCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCAttt > 1:3647276/1‑68 (MQ=255) cGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCtgt < 1:2433094/69‑1 (MQ=255) cGCCAATGGACCGATTTGGAATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCtgtg < 1:5637389/70‑1 (MQ=255) gCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGa < 1:5374930/71‑1 (MQ=255) cAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGAt < 1:1977465/70‑1 (MQ=255) aaTGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCt > 1:2505024/1‑71 (MQ=255) aaTGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCt < 1:5653266/71‑1 (MQ=255) aTGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTga < 1:212198/43‑1 (MQ=255) aTGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATc > 1:3420840/1‑69 (MQ=255) aTGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCtt < 1:1390692/71‑1 (MQ=255) aTGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCt > 1:744004/1‑70 (MQ=255) tGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATc > 1:76737/1‑68 (MQ=255) tGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCt > 1:3264146/1‑69 (MQ=255) tGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCt > 1:3786534/1‑69 (MQ=255) ggACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCtt < 1:5243122/69‑1 (MQ=255) ggACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCtt < 1:2048555/69‑1 (MQ=255) ggACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTag > 1:439355/1‑71 (MQ=255) GACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCtgt < 1:663389‑M1/61‑1 (MQ=255) GACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTag < 1:3141259‑M1/70‑1 (MQ=255) | AGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAG > minE/1165218‑1165356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |