| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2374524 = | 35 (0.570) | 15 (0.270) +GAAG |
3/90 | NT | 26.0% | coding (536/783 nt) | tatD | DNase, magnesium‑dependent |
| ? | minE | 2940907 = | 58 (0.940) | coding (554/999 nt) | fecC | iron‑dicitrate transporter subunit | |||||
TTCGATCAGTAATTTTTCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCCACGCACGCCTGCATCTCTTCGCGTGTG > minE/2374457‑2374592 | ttCGATCAGTAATTTTTCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCg > 1:341303/1‑70 (MQ=255)ttCGATCAGTAATTTTTCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCg > 1:3605710/1‑70 (MQ=255) gATCAGTAATTTTTCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCaa < 1:2829695/70‑1 (MQ=255) tAATTTTTCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCg < 1:5357340/61‑1 (MQ=255) tAATTTTTCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCg < 1:5266858/61‑1 (MQ=255) aTTTTTCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCa < 1:892568/67‑1 (MQ=255) aTTTTTCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCg > 1:459562/1‑71 (MQ=255) aTTTTTCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCg > 1:2122918/1‑71 (MQ=255) ttttCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCgg > 1:4014855/1‑70 (MQ=255) tttCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCaa > 1:337177/1‑65 (MQ=255) tttCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCaa > 1:4789500/1‑65 (MQ=255) gccgGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGcc < 1:1942003/71‑1 (MQ=255) cgGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCaa < 1:216411/52‑1 (MQ=255) aaTCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAAcc > 1:4629738/1‑57 (MQ=255) aaTCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTaa > 1:5239245/1‑62 (MQ=255) aaTCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAAAGCCGata > 1:1593150/1‑70 (MQ=255) tCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCgg < 1:4400274/57‑1 (MQ=255) aaCGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAAc > 1:375258/1‑47 (MQ=255) aaCGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAAc > 1:832681/1‑47 (MQ=255) aCGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAAtt < 1:1523984/71‑1 (MQ=255) cGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTc < 1:599344/71‑1 (MQ=255) cccGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCcacg > 1:4840939/1‑71 (MQ=255) cccGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCcacg > 1:5587776/1‑71 (MQ=255) ccGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCcacgc < 1:4234168/71‑1 (MQ=255) ccGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCcacg > 1:1948260/1‑70 (MQ=255) cGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCcacgca > 1:2726293/1‑71 (MQ=255) gCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCcacgc > 1:560556/1‑69 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCaa < 1:3815422‑M1/12‑1 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCaa < 1:5464082‑M1/12‑1 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCAAc < 1:5605238‑M1/13‑1 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCAAc < 1:4304800‑M1/13‑1 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCAACCg < 1:3476691‑M1/15‑1 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCAACCg < 1:296584‑M1/15‑1 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCAACCGGt > 1:311424‑M1/24‑40 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCAACCGGt > 1:4638053‑M1/24‑40 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCAACCGGt > 1:221378‑M1/24‑40 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCAACCGGt > 1:5203469‑M1/24‑40 (MQ=255) actgcgtcttttactggctcttcTCGCTAACCCAACCGGTa < 1:315000‑M1/18‑1 (MQ=255) actgcgtcttttactggctcttcTCGCTAAACCAACCGGTa < 1:4281735‑M1/18‑1 (MQ=255) tgcgtcttttactggctcttcTCGCTAACCCAACCGGt > 1:1569305‑M1/22‑38 (MQ=255) gcgtcttttactggctcttcTCGCTAACCCAACCGGt > 1:181526‑M1/21‑37 (MQ=255) gCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGt < 1:2417244/37‑1 (MQ=255) gCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGt < 1:2252053/37‑1 (MQ=255) tcttttactggctcttcTCGCTAACCCAACCGGTaa < 1:4290858‑M1/19‑1 (MQ=255) ccAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATaaa > 1:5040273/1‑48 (MQ=255) cAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCCACGCACGCCTGc < 1:4269696/70‑1 (MQ=255) gTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAAt < 1:4933495/46‑1 (MQ=255) gTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTc < 1:1785000/48‑1 (MQ=255) cgcgTCGTTCATCGCAAACCCAACCGGTAATGCCGATATaa > 1:1964198/1‑41 (MQ=255) cgcgTCGTTCATCGCAAACCCAACCGGTAATGCCGATATaa > 1:616850/1‑41 (MQ=255) cgcgTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCAt > 1:3188071/1‑48 (MQ=255) cgcgTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCCACGCACGCCTGCATctct > 1:4817289/1‑71 (MQ=255) cgcgTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCCACGCACGCCTGCATctct > 1:989722/1‑71 (MQ=255) gtcgtTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCCACGCACGCCTGCATCTCTTc < 1:1363117/70‑1 (MQ=255) ttCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCCACGCACGCCTGCATctct < 1:2836345/64‑1 (MQ=255) ttCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCCACGCACGCCTGCATCTCTTCGCgt < 1:5316504/70‑1 (MQ=255) aTCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCCACGCACGCCTGCATCTCTTCGCGtgtg < 1:2937724/70‑1 (MQ=255) tCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCCACGCACGCCTGCATCTCTTcgc < 1:774073/64‑1 (MQ=255) | TTCGATCAGTAATTTTTCCGCCGGAATCAACGGCAAAAGTTCCCGCAGCTCCAGTCCGCGTCGTTCATCGCAAACCCAACCGGTAATGCCGATATAAATTCCATGCGCCACGCACGCCTGCATCTCTTCGCGTGTG > minE/2374457‑2374592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |