| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2374524 = | 35 (0.570) | 15 (0.270) +GAAG |
3/90 | NT | 26.0% | coding (536/783 nt) | tatD | DNase, magnesium‑dependent |
| ? | minE | 2940907 = | 58 (0.940) | coding (554/999 nt) | fecC | iron‑dicitrate transporter subunit | |||||
GTGACCACCACCGGCAAGAGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAA > minE/2940844‑2940975 | gTGACCACCACCGGCAAGAGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGt > 1:940783/1‑70 (MQ=255) tGACCACCACCGGCAAGAGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTaa < 1:948161/71‑1 (MQ=255) tGACCACCACCGGCAAGAGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTaa < 1:941535/71‑1 (MQ=255) gACCACCACCGGCAAGAGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTaa > 1:1223701/1‑70 (MQ=255) accaccaccGGCAAGAGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTaaaa < 1:3885117/71‑1 (MQ=255) accaccaccGGCAAGAGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTaa > 1:61602/1‑69 (MQ=255) ccaccGGCAAGAGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAg > 1:859392/1‑68 (MQ=255) cAAGAGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCATCCAGTaaaa < 1:2143037/60‑1 (MQ=255) aaGAGCTGCCAGACATCCTGCCAGCGGGTGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGt < 1:1680369/67‑1 (MQ=255) gagCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGa > 1:1148455/1‑59 (MQ=255) gagCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGa > 1:3453402/1‑59 (MQ=255) agCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCa > 1:3928100/1‑69 (MQ=255) agCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCAt > 1:2804368/1‑70 (MQ=255) agCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATg < 1:3311750/71‑1 (MQ=255) gCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGa > 1:5677543/1‑71 (MQ=255) tGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTa < 1:866669/62‑1 (MQ=255) ccAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCtt > 1:4696969/1‑71 (MQ=255) ccAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCtt < 1:5536495/71‑1 (MQ=255) ccAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCtt > 1:3797343/1‑71 (MQ=255) ccAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCt < 1:851021/70‑1 (MQ=255) aGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCg > 1:2440963/1‑71 (MQ=255) cATCCTGCCAGCGGGCGTTGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGcc < 1:728398/71‑1 (MQ=255) aTCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTaaaa < 1:3575990/45‑1 (MQ=255) aTCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATc > 1:4623525/1‑63 (MQ=255) gCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCcagcag > 1:4538324/1‑70 (MQ=255) ccAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCcagcagca < 1:899833/71‑1 (MQ=255) cAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCcagcagcag > 1:2600287/1‑71 (MQ=255) cAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCcagcagcag < 1:4445747/71‑1 (MQ=255) cAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCcagcagcag > 1:15255/1‑71 (MQ=255) gCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCgg < 1:1869783/59‑1 (MQ=255) gCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAggg < 1:4979176/71‑1 (MQ=255) cGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGt < 1:2335046/71‑1 (MQ=255) ttaccggttgggttagcgagaagAGCCAGTAAAAGa < 1:4290858‑M2/13‑1 (MQ=255) gggCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGt > 1:1040648/1‑70 (MQ=255) taccggttggtttagcgagaagAGCCAGTAAAAGACGCAGt < 1:4281735‑M2/19‑1 (MQ=255) taccggttgggttagcgagaagAGCCAGTAAAAGACGCAGt < 1:315000‑M2/19‑1 (MQ=255) accggttgggttagcgagaagAGCCAGTAAAAGACgca > 1:1569305‑M2/22‑37 (MQ=255) accggttgggttagcgagaagAGCCAGTAAAAGACGc > 1:181526‑M2/22‑37 (MQ=255) accggttgggttagcgagaagAGCCAGTAAAAGACGCAGt > 1:221378‑M2/22‑40 (MQ=255) accggttgggttagcgagaagAGCCAGTAAAAGACGCAGt > 1:5203469‑M2/22‑40 (MQ=255) accggttgggttagcgagaagAGCCAGTAAAAGACGCAGt > 1:4638053‑M2/22‑40 (MQ=255) accggttgggttagcgagaagAGCCAGTAAAAGACGCAGt > 1:311424‑M2/22‑40 (MQ=255) cGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATg < 1:1323210/71‑1 (MQ=255) gTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGc > 1:1657209/1‑71 (MQ=255) gTGGCACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGc < 1:4619452/71‑1 (MQ=255) cggttgggttagcgagaagAGCCAGTAAAAGACGCAGt < 1:3476691‑M2/19‑1 (MQ=255) cggttgggttagcgagaagAGCCAGTAAAAGACGCAGt < 1:296584‑M2/19‑1 (MQ=255) gttgggttagcgagaagAGCCAGTAAAAGACGCAGt < 1:5605238‑M2/19‑1 (MQ=255) gttgggttagcgagaagAGCCAGTAAAAGACGCAGt < 1:4304800‑M2/19‑1 (MQ=255) gggACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCtt > 1:3187980/1‑48 (MQ=255) gggACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCgg > 1:1920005/1‑71 (MQ=255) ttgggttagcgagaagAGCCAGTAAAAGACGCAGt < 1:3815422‑M2/19‑1 (MQ=255) ttgggttagcgagaagAGCCAGTAAAAGACGCAGt < 1:5464082‑M2/19‑1 (MQ=255) ggACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGa > 1:396076/1‑43 (MQ=255) gACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGt < 1:5315348/71‑1 (MQ=255) gACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGt < 1:5000159/71‑1 (MQ=255) acacTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCcagcagc > 1:2260745/1‑56 (MQ=255) acacTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCcagcagc > 1:2478118/1‑56 (MQ=255) acacTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGt > 1:2037066/1‑70 (MQ=255) acacTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTa < 1:1299109/71‑1 (MQ=255) acacTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTa < 1:3417407/71‑1 (MQ=255) acTCCGCCTGCGAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGt < 1:2841071/68‑1 (MQ=255) acTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAg > 1:1212340/1‑71 (MQ=255) cTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGt < 1:844676/67‑1 (MQ=255) ccGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTc > 1:2409728/1‑41 (MQ=255) ccGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGcc > 1:806127/1‑71 (MQ=255) ccGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGcc > 1:4873813/1‑71 (MQ=255) cGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGAt > 1:155178/1‑36 (MQ=255) cGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGAt > 1:2516497/1‑36 (MQ=255) cGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGcc > 1:4806669/1‑70 (MQ=255) cGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGcc > 1:4559467/1‑70 (MQ=255) cGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGcc > 1:3849812/1‑70 (MQ=255) cGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGcc < 1:3160664/70‑1 (MQ=255) tGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATa > 1:3405125/1‑70 (MQ=255) tGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATa > 1:1464831/1‑70 (MQ=255) gccagccaGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATAc > 1:979894/1‑70 (MQ=255) ccagccagTAAAAGATGCCGTAAGCATGATCTTCGGCcagcag < 1:965132/43‑1 (MQ=255) ccagccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAggg < 1:3761631/48‑1 (MQ=255) ccagccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAggg < 1:3583650/48‑1 (MQ=255) ccagccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAggg < 1:4773106/48‑1 (MQ=255) ccagccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACaa < 1:2575713/71‑1 (MQ=255) ccagccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACaa < 1:63706/71‑1 (MQ=255) ccagccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACa < 1:3190775/70‑1 (MQ=255) agccagTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGa > 1:4863534/1‑49 (MQ=255) | GTGACCACCACCGGCAAGAGCTGCCAGACATCCTGCCAGCGGGCGTGGGACACTCCGCCTGCCAGCCAGTAAAAGATGCCGTAAGCATGATCTTCGGCCAGCAGCAGGGTGATGCGGGTAAGGCCCATACAA > minE/2940844‑2940975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |