| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 369453 = | 61 (0.990) | 6 (0.130) +TGTGCGGCCGTC |
3/74 | NT | 12.8% | coding (400/3882 nt) | entF | enterobactin synthase multienzyme complex component, ATP‑dependent |
| ? | minE | = 425443 | 48 (0.780) | coding (610/1149 nt) | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase | |||||
AATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGAT > minE/425381‑425512 | aaTATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGcttctt > 1:5690345/1‑71 (MQ=255) atatACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCttt > 1:1706121/1‑71 (MQ=255) tataCGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTc < 1:2873897/71‑1 (MQ=255) taCGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCaa > 1:4212114/1‑71 (MQ=255) gCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTc < 1:6934/71‑1 (MQ=255) ttGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTcg < 1:4727359/64‑1 (MQ=255) ttGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTcg < 1:2566012/64‑1 (MQ=255) gTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTg > 1:4989949/1‑67 (MQ=255) gTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGa > 1:634537/1‑69 (MQ=255) gTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAg < 1:5298760/70‑1 (MQ=255) gTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGt > 1:1742173/1‑71 (MQ=255) gTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGt > 1:4844344/1‑71 (MQ=255) gTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCATTTGCTTCTTTCAACGTCGCGTTGGa > 1:996687/1‑69 (MQ=255) tACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTg < 1:3835166/71‑1 (MQ=255) aCAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCaa > 1:750588/1‑55 (MQ=255) aGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGAcc > 1:5104190/1‑71 (MQ=255) aGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGAcc > 1:4100623/1‑71 (MQ=255) aTGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCgg > 1:271231/1‑71 (MQ=255) tGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCaa > 1:3143265/1‑50 (MQ=255) tGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGa > 1:2076953/1‑66 (MQ=255) tGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCgg > 1:5455639/1‑70 (MQ=255) gTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGa < 1:4603520/71‑1 (MQ=255) tGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGa < 1:1737036/70‑1 (MQ=255) ggCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGaaa > 1:3679615/1‑71 (MQ=255) gCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAAc < 1:2147153/71‑1 (MQ=255) aaaGGTAATCCCCGCGCGGAAACCGGCTTTTGcttct > 1:2569036/1‑37 (MQ=255) aaaGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCaa > 1:2388252/1‑42 (MQ=255) aaaGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCaa > 1:1241583/1‑42 (MQ=255) aaaGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCaa > 1:2597687/1‑42 (MQ=255) aaaGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTg < 1:2411763/57‑1 (MQ=255) aaaGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACca > 1:5074358/1‑71 (MQ=255) aaGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACcac < 1:3964015/71‑1 (MQ=255) aaGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACcac < 1:3332395/71‑1 (MQ=255) aaGGTAAACCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACca > 1:4108857/1‑70 (MQ=255) gTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCa < 1:3274375/37‑1 (MQ=255) cgcgcgGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACca < 1:3462193/59‑1 (MQ=255) gcgGAAACCGGCTTTTGCTTATTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTg > 1:694466/1‑71 (MQ=255) ggAAACCGGCTTTgacggccgcacacagcgttatcacca < 1:3376153‑M2/39‑27 (MQ=255) ggAAACCGGCTTTgacggccgcacacagcgttatcacc > 1:1516602‑M2/1‑13 (MQ=255) ggAAACCGGCTTTgacggccgcacacagcgttatcacc > 1:5142248‑M2/1‑13 (MQ=255) aaaCCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAg < 1:2363287/71‑1 (MQ=255) aaaCCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAg < 1:1050950/71‑1 (MQ=255) aaaCCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAg < 1:2356571/71‑1 (MQ=255) aaaCCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAg < 1:3898494/71‑1 (MQ=255) aaCCGGCTTTgacggccgcacacagcgttatcacc < 1:4272849‑M2/35‑26 (MQ=255) aaCCGGCTTTgacggccgcacacagcgttatcacc < 1:3978948‑M2/35‑26 (MQ=255) aaCCGGCTTTgacggccgcacacagcgttatcacc < 1:5392012‑M2/35‑26 (MQ=255) aCCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGtt > 1:3441874/1‑71 (MQ=255) ccGGCTTTCGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACcac < 1:4512218/50‑1 (MQ=255) cGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGaa < 1:471330/44‑1 (MQ=255) cGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGaa < 1:2328485/44‑1 (MQ=255) cGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGaa < 1:2947411/44‑1 (MQ=255) cGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTg < 1:3133524/71‑1 (MQ=255) ggCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGaa < 1:1319921/43‑1 (MQ=255) cTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCt < 1:4037119/70‑1 (MQ=255) cTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCt < 1:4161954/70‑1 (MQ=255) cTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCA‑TTGCCAGTTTGCt < 1:505751/69‑1 (MQ=255) ttGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCAtt > 1:3883711/1‑55 (MQ=255) ttGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCtgat < 1:1325908/70‑1 (MQ=255) ttGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCtgat < 1:1318993/70‑1 (MQ=255) ttGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCt < 1:4665263/67‑1 (MQ=255) | AATATACGGCATCGCGTTGTACAGATGGGTGGCAAAGGTAATCCCCGCGCGGAAACCGGCTTTTGCTTCTTTCAACGTCGCGTTGGAGTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGAT > minE/425381‑425512 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |