| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 7063 | 40 (0.650) | 16 (0.280) +GATT |
10/92 | NT | 42.0% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | minE | = 1611756 | 8 (0.130) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
ATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/7046‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATG < minE/1611756‑1611689 |||| tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAAT > 1:84741/3‑71tgAAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTT > 1:1709854/3‑41 AAAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGA > 1:2079405/1‑43 AAAAATGCCAATCAACGATTCTTCCTGAGGGAACGACT > 1:2877343/1‑38 AAAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTA > 1:2776073/1‑71 AAATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATG < 1:2658309/40‑1 AATGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATA > 1:2170814/1‑71 TGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATAT > 1:3642356/1‑70 TGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCA < 1:1199692/62‑1 TGCCAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCA < 1:3811803/62‑1 CAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGT > 1:1108235/1‑71 CAATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGT > 1:3610641/1‑71 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTT > 1:2322489/1‑71 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTT < 1:2730875/71‑1 AATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTT > 1:1974547/1‑71 ATCATCGATTCTTCCTGAGGGAACGACTTATGAAACTA < 1:3215183/38‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTT < 1:2488745/69‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:2468388/59‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCCGCAATGTATATCAGTTTA < 1:1715330/71‑1 TCATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA < 1:2133507/39‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAG > 1:3739663/1‑71 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAA < 1:1220312/70‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAA < 1:592652/70‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAA < 1:2284564/70‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATC > 1:3555848/1‑63 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATC > 1:16474/1‑63 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:519784/57‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:2350406/57‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:1710037/57‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATG < 1:189704/57‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:2702419/42‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:929206/42‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:1269844/42‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:2630830/42‑1 ATCGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCA < 1:591225/42‑1 TCGATTCTTCCTGAGGGAACGACTTATGAAACTAAA > 1:2772974/1‑36 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGA > 1:400098/1‑71 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:930765/1‑42 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:199865/1‑42 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:1294641/1‑42 CGATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACA > 1:1183611/1‑42 GATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAA > 1:2291776/1‑52 ATTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTT > 1:2050921/1‑45 TTCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATG > 1:583448/1‑70 TCTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTC > 1:480021/1‑44 |||| ATAAAAATGCCAATCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/7046‑7063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTCCTGAGGGAACGACTTATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATG < minE/1611756‑1611689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |