| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 7063 | 40 (0.650) | 16 (0.280) +GATT |
10/92 | NT | 42.0% | coding (897/1431 nt) | yaaJ | predicted transporter |
| ? | minE | = 1611756 | 8 (0.130) | coding (1397/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
ACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGAAC > minE/6994‑7133 | aCCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAatcatc < 1:470130/70‑1 (MQ=255)aCCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAatcatc < 1:2619727/70‑1 (MQ=255)aCCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCt > 1:2505669/1‑71 (MQ=255) tatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa < 1:651197/65‑1 (MQ=255) tatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa < 1:256096/65‑1 (MQ=255) tatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa < 1:2642449/65‑1 (MQ=255) tatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa < 1:3048567/65‑1 (MQ=255) tatCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa < 1:1463046/65‑1 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:1033299/1‑63 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:2018487/1‑63 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:947224/1‑63 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:1687589/1‑63 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACa > 1:2010197/1‑62 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgc > 1:1370665/1‑71 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgc > 1:1556871/1‑71 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgc > 1:3697477/1‑71 (MQ=255) tCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgc > 1:3732297/1‑71 (MQ=255) gCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATccc < 1:1307773/64‑1 (MQ=255) cATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTg < 1:3177556/71‑1 (MQ=255) cATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGACAATCATCTGGACAATCCCTTGCGCTg < 1:1291953/71‑1 (MQ=255) tGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCtt < 1:2425114/63‑1 (MQ=255) gcgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg > 1:2735398/1‑70 (MQ=255) gcgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAAACCCTTGCGCt > 1:1528601/1‑66 (MQ=255) cgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:1501718/1‑54 (MQ=255) cgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:3320825/1‑54 (MQ=255) cgcTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACaa > 1:1009729/1‑54 (MQ=255) cTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgc < 1:376753/60‑1 (MQ=255) cTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgc < 1:686932/60‑1 (MQ=255) cTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgc < 1:995452/60‑1 (MQ=255) gATGACCAGGGTGTCGATAAAAATGCCAATCATCTg < 1:2231350/36‑1 (MQ=255) gATGACCAGGGTGTCGATAAAAATGCCAATCATCTg < 1:645419/36‑1 (MQ=255) gggTGTCGATAAAAATGCCAATCATCTGGACAATCCCt > 1:869225/1‑38 (MQ=255) gtgtCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCg < 1:2628899/46‑1 (MQ=255) tCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgc < 1:177019/71‑1 (MQ=255) tCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgc > 1:2382070/1‑71 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACgccgctgccgct < 1:2970697/70‑1 (MQ=255) gATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGccgctgccgctg > 1:1088703/1‑71 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaat > 1:84741‑M1/3‑18 (MQ=255) tgaaaaatgCCAATCATCgattcttcctgagggaacgactt > 1:1709854‑M1/3‑18 (MQ=255) aTAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCcgctgccgctgc < 1:1751077/71‑1 (MQ=255) aaaaaTGCCAATCATCgattcttcctgagggaacgacttatga > 1:2079405‑M1/1‑16 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGctgccgctgccg > 1:1922904/1‑71 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGctgccgctgccg > 1:2725277/1‑71 (MQ=255) aaaaaTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGctgccgctgccg > 1:621152/1‑71 (MQ=255) aaaaaTGCCAATCAACgattcttcctgagggaacgact > 1:2877343‑M1/1‑16 (MQ=255) aaaaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgta > 1:2776073‑M1/1‑15 (MQ=255) aaaTGCCAATCATCgattcttcctgagggaacgacttatg < 1:2658309‑M1/40‑27 (MQ=255) aaTGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtata > 1:2170814‑M1/1‑13 (MQ=255) aTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGtt > 1:1705236/1‑71 (MQ=255) aTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGtt < 1:1647724/71‑1 (MQ=255) aTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGATGCCGCTGCCGCGtt < 1:2204196/71‑1 (MQ=255) tGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatat > 1:3642356‑M1/1‑11 (MQ=255) tGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggca < 1:1199692‑M1/62‑52 (MQ=255) tGCCAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggca < 1:3811803‑M1/62‑52 (MQ=255) cAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagt > 1:1108235‑M1/1‑8 (MQ=255) cAATCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagt > 1:3610641‑M1/1‑8 (MQ=255) aaTCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtt > 1:2322489‑M1/1‑7 (MQ=255) aaTCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtt > 1:1974547‑M1/1‑7 (MQ=255) aaTCATCgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtt < 1:2730875‑M1/71‑65 (MQ=255) aaTCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCg < 1:1076461/71‑1 (MQ=255) atcatcgattcttcctgagggaacgacttatgaaacta < 1:3215183‑M1/38‑33 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtt < 1:2488745‑M1/69‑65 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:2468388‑M1/59‑55 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaagaccacattgttccgcaatgtatatcagttta < 1:1715330‑M1/71‑67 (MQ=255) tcatcgattcttcctgagggaacgacttatgaaactaaa < 1:2133507‑M1/39‑35 (MQ=255) tcatcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTc > 1:3337869/1‑71 (MQ=255) catcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTc > 1:2386578/1‑70 (MQ=255) catcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTc > 1:1261304/1‑70 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaag > 1:3739663‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaa < 1:2284564‑M1/70‑68 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaa < 1:592652‑M1/70‑68 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaa < 1:1220312‑M1/70‑68 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatc > 1:16474‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatc > 1:3555848‑M1/1‑3 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:1710037‑M1/57‑55 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:519784‑M1/57‑55 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:2350406‑M1/57‑55 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatg < 1:189704‑M1/57‑55 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagacca < 1:2702419‑M1/42‑40 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagacca < 1:929206‑M1/42‑40 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagacca < 1:591225‑M1/42‑40 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagacca < 1:1269844‑M1/42‑40 (MQ=255) atcgattcttcctgagggaacgacttatgaaactaaagacca < 1:2630830‑M1/42‑40 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCg > 1:1306645/1‑70 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGa < 1:3210050/71‑1 (MQ=255) atcTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGa < 1:1933770/71‑1 (MQ=255) tcgattcttcctgagggaacgacttatgaaactaaa > 1:2772974‑M1/1‑2 (MQ=255) cgattcttcctgagggaacgacttatgaaactaaagaccacattgttcggcaatgtatatcagtttaagga > 1:400098‑M1/1‑1 (MQ=255) cgattcttcctgagggaacgacttatgaaactaaagaccaca > 1:1294641‑M1/1‑1 (MQ=255) cgattcttcctgagggaacgacttatgaaactaaagaccaca > 1:1183611‑M1/1‑1 (MQ=255) cgattcttcctgagggaacgacttatgaaactaaagaccaca > 1:930765‑M1/1‑1 (MQ=255) cgattcttcctgagggaacgacttatgaaactaaagaccaca > 1:199865‑M1/1‑1 (MQ=255) | ACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGAAC > minE/6994‑7133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |