| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2578583 = | 99 (1.340) | 7 (0.100) | 3/94 | NT | 7.4% | coding (82/1398 nt) | yhjA | predicted cytochrome C peroxidase |
| ? | minE | 2578605 = | 82 (1.190) | coding (104/1398 nt) | yhjA | predicted cytochrome C peroxidase | |||||
CTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCGTTTATTATCGTGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2578655‑2578583‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAAAG > minE/2578605‑2578673 CTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCGTTTATTATCGTGG > 1:2674606/1‑71 AAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCGTTTATTATCGTGGT < 1:2356951/69‑1 TTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCGTTTATTATCGTGGT < 1:954768/64‑1 GTTTACTGCGTTTATTATCGTGGTAAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGT > 1:4468896/1‑71 GTTTACTGCGTTTATTATCGTGGTAAACAGGCCGATG > 1:3578354/1‑37 ACTGCGTTTATTATCGTGGTAAACAGGCCGATGTTCAGGCATCT < 1:313463/44‑1 TGCGTTTATTATCGTGGTAAACAGGCTGATGTTCAGGCATCTGC > 1:2504224/1‑44 TGCGTTTATTATCGTGGTAAACAGGCCGATGTTCAGGCATCTGC > 1:3083996/1‑44 TGCGTTTATTATCGTGGTAAACAGGCCGATGTTCAGGCATCTGC > 1:2493949/1‑44 TGCGTTTATTATCGTGGTAAACAGGCCGATGTTCAGGCATCTGC > 1:2270571/1‑44 GTAAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAAA < 1:4029133/71‑1 TAAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAAAG < 1:715609/71‑1 TAAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAA < 1:876039/67‑1 TAAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAAT < 1:83577/43‑1 AAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAAAG < 1:1780310/70‑1 AAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTC > 1:1149441/1‑60 AAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTC > 1:2449118/1‑60 AAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTC > 1:2378653/1‑60 CTAAAACCTTATTATTTTCACTGACAGCAGATGCCTGAACATCGGCCTGTTTACTGCGTTTATTATCGTGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2578655‑2578583‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAAAG > minE/2578605‑2578673 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |