| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 391476 = | 44 (0.600) | 6 (0.090) | 3/94 | NT | 11.0% | intergenic (‑10/+137) | ybdN/ybdO | conserved hypothetical protein/predicted DNA‑binding transcriptional regulator |
| ? | minE | 391506 = | 56 (0.810) | intergenic (‑40/+107) | ybdN/ybdO | conserved hypothetical protein/predicted DNA‑binding transcriptional regulator | |||||
TAATACGCTCTCGTGCAGCTTCCAGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAG > minE/391406‑391545 | ttattcacagcgcgaatgaaaaataaaacactctgctttacagtgtttactttataattaacagacttatc < 1:4270805‑M1/1‑1 (MQ=255) aaTACGCTCTCGTGCAGCTTCCAGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGct > 1:833011/1‑71 (MQ=255) aCGCTCTCGTGCAGCTTCCAGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGctct > 1:4396928/1‑70 (MQ=255) cGCTCTCGTGCAGCTTCCAGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGctctct > 1:2378621/1‑71 (MQ=255) cGCTCTCGTGCAGCTTCCAGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGctctct > 1:4078845/1‑71 (MQ=255) gCTCTCGTGCAGCTTCCAGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGctctct > 1:1560320/1‑70 (MQ=255) cAGCTTCCAGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACa < 1:1569693/71‑1 (MQ=255) tgaaaaataaaacactctgctttacagtgtttactttataattaacagacttatct > 1:4148728‑M1/55‑56 (MQ=255) ttCCAGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAggg < 1:3454973/70‑1 (MQ=255) aGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGaa > 1:1252342/1‑56 (MQ=255) aGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGAt > 1:4022859/1‑70 (MQ=255) aGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATc < 1:1599189/71‑1 (MQ=255) atatTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGt > 1:2858235/1‑71 (MQ=255) atatTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGt > 1:768680/1‑71 (MQ=255) aacactctgctttacagtgtttactttataattaacagacttatCTCTCTGAACGTTACAGGGTGATCAGt > 1:1405075‑M1/45‑71 (MQ=255) aacactctgctttacagtgtttactttataattaacagacttatCTCTCTGAACGTTACAGGGTGATCAGt > 1:2262663‑M1/45‑71 (MQ=255) aacactctgctttacagtgtttactttataattaacagacttatCTCTCTGAACGTTACAGGGTGATCAGt > 1:3216455‑M1/45‑71 (MQ=255) tatTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTg < 1:858335/71‑1 (MQ=255) tatTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTg < 1:852731/71‑1 (MQ=255) acactctgctttacagtgtttactttataattaacagacttatCTCTCTGAACGTTACAGGGTGATCa > 1:545395‑M1/44‑68 (MQ=255) acactctgctttacagtgtttactttataattaacagacttatCTCTCTGAACGTTACAGGGTGATCa > 1:1167650‑M1/44‑68 (MQ=255) actctgctttacagtgtttactttataattaacagacttatCTCTCTGAACGTTACAGGGTGATCAGt < 1:726390‑M1/27‑1 (MQ=255) gAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTgaga < 1:573870/70‑1 (MQ=255) aGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATa < 1:3511410/71‑1 (MQ=255) aGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATa < 1:3243279/71‑1 (MQ=255) cGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACa < 1:3324471/52‑1 (MQ=255) gAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGt < 1:2192580/40‑1 (MQ=255) gAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa < 1:3716524/71‑1 (MQ=255) gAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa < 1:3672922/71‑1 (MQ=255) gAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa < 1:2782515/71‑1 (MQ=255) aTTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTa > 1:2390223/1‑40 (MQ=255) aTTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACa > 1:2300823/1‑42 (MQ=255) ttATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGtt < 1:2537983/64‑1 (MQ=255) tataAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATtata < 1:2838065/70‑1 (MQ=255) ataAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:1769949/1‑64 (MQ=255) aaTAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGt < 1:3541626/70‑1 (MQ=255) aaTAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGt < 1:575849/70‑1 (MQ=255) aTAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTaa < 1:3462774/71‑1 (MQ=255) aCATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATaaa > 1:1841154/1‑63 (MQ=255) aCATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAacac < 1:4434708/71‑1 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:4282332/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:4218368/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:244370/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:117122/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:2028642/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:272178/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:2045352/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:3075608/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa > 1:1542315/1‑70 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa > 1:666712/1‑70 (MQ=255) aaGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTaaa > 1:1127285/1‑61 (MQ=255) aaGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTaaa > 1:1986680/1‑61 (MQ=255) aaGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTaaa > 1:3169296/1‑61 (MQ=255) aaGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa < 1:3610844/68‑1 (MQ=255) gACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATaa > 1:1828204/1‑38 (MQ=255) gACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATaa > 1:177553/1‑38 (MQ=255) gACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATaa > 1:2694867/1‑38 (MQ=255) gACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATaa > 1:1266964/1‑38 (MQ=255) aCGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCag < 1:2738492/71‑1 (MQ=255) aCGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCag < 1:2572504/71‑1 (MQ=255) aCGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCag < 1:2377452/71‑1 (MQ=255) cGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCag < 1:1878878/70‑1 (MQ=255) gCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCagag > 1:3738117/1‑71 (MQ=255) | TAATACGCTCTCGTGCAGCTTCCAGAATATTGAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAG > minE/391406‑391545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |