| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 391476 = | 44 (0.600) | 6 (0.090) | 3/94 | NT | 11.0% | intergenic (‑10/+137) | ybdN/ybdO | conserved hypothetical protein/predicted DNA‑binding transcriptional regulator |
| ? | minE | 391506 = | 56 (0.810) | intergenic (‑40/+107) | ybdN/ybdO | conserved hypothetical protein/predicted DNA‑binding transcriptional regulator | |||||
GAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCATTCGCGCTGTGAATAA > minE/391437‑391575 | gAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTgaga < 1:573870/70‑1 (MQ=255) aGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATa < 1:3511410/71‑1 (MQ=255) aGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATa < 1:3243279/71‑1 (MQ=255) gAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa < 1:3672922/71‑1 (MQ=255) gAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa < 1:3716524/71‑1 (MQ=255) gAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa < 1:2782515/71‑1 (MQ=255) ttATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGtt < 1:2537983/64‑1 (MQ=255) tataAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATtata < 1:2838065/70‑1 (MQ=255) ataAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:1769949/1‑64 (MQ=255) aaTAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGt < 1:3541626/70‑1 (MQ=255) aaTAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGt < 1:575849/70‑1 (MQ=255) aTAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTaa < 1:3462774/71‑1 (MQ=255) aCATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATaaa > 1:1841154/1‑63 (MQ=255) aCATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAacac < 1:4434708/71‑1 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:2028642/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:2045352/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:4218368/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:3075608/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:244370/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:4282332/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:117122/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTaa > 1:272178/1‑51 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa > 1:666712/1‑70 (MQ=255) tGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa > 1:1542315/1‑70 (MQ=255) aaGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTaaa > 1:3169296/1‑61 (MQ=255) aaGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTaaa > 1:1986680/1‑61 (MQ=255) aaGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTaaa > 1:1127285/1‑61 (MQ=255) aaGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa < 1:3610844/68‑1 (MQ=255) gACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATaa > 1:1266964/1‑38 (MQ=255) gACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATaa > 1:2694867/1‑38 (MQ=255) gACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATaa > 1:177553/1‑38 (MQ=255) gACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATaa > 1:1828204/1‑38 (MQ=255) aCGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCag < 1:2738492/71‑1 (MQ=255) aCGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCag < 1:2572504/71‑1 (MQ=255) aCGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCag < 1:2377452/71‑1 (MQ=255) cGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCag < 1:1878878/70‑1 (MQ=255) gCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCagag > 1:3738117/1‑71 (MQ=255) CTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAgtgt < 1:3357198‑M1/71‑1 (MQ=255) tctGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTg < 1:1433485/57‑1 (MQ=255) tctGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTg < 1:2944913/57‑1 (MQ=255) tctGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTg < 1:3323163/57‑1 (MQ=255) actgatcaccctgtaacgttcagagagATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAgt < 1:726390‑M2/41‑1 (MQ=255) actgatcaccctgtaacgttcagagagATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGtt > 1:1405075‑M2/28‑71 (MQ=255) actgatcaccctgtaacgttcagagagATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGtt > 1:3216455‑M2/28‑71 (MQ=255) actgatcaccctgtaacgttcagagagATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGtt > 1:2262663‑M2/28‑71 (MQ=255) ctGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGttt > 1:4601475/1‑71 (MQ=255) tgatcaccctgtaacgttcagagagATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAgtgt > 1:1167650‑M2/26‑68 (MQ=255) tgatcaccctgtaacgttcagagagATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAgtgt > 1:545395‑M2/26‑68 (MQ=255) tGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa < 1:370894/57‑1 (MQ=255) tGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa < 1:555269/57‑1 (MQ=255) tGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa < 1:916658/57‑1 (MQ=255) tGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa < 1:2621602/57‑1 (MQ=255) tGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa < 1:2342559/57‑1 (MQ=255) tGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGtt < 1:3292568/69‑1 (MQ=255) aaCGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGttt < 1:639342/68‑1 (MQ=255) aaCGTTACAGGGTGATCACTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTa < 1:3119884/70‑1 (MQ=255) aCGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTAtt > 1:612562/1‑71 (MQ=255) gTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTAtttt < 1:4550182/71‑1 (MQ=255) ttACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTAttttt < 1:2792621/71‑1 (MQ=255) aCAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTa > 1:2981572/1‑40 (MQ=255) aCAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTa > 1:2370815/1‑40 (MQ=255) aCAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTa > 1:3687318/1‑40 (MQ=255) cAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCAt > 1:2633338/1‑71 (MQ=255) aGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCAtt < 1:4514929/71‑1 (MQ=255) aGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCAtt < 1:4750759/71‑1 (MQ=255) ggTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCATTcg < 1:475059/71‑1 (MQ=255) gTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTa < 1:3345494/44‑1 (MQ=255) gTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCATTcgc < 1:2709046/71‑1 (MQ=255) aTCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCATTCGCGCt < 1:4597907/71‑1 (MQ=255) aTCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCATTCGCGCt < 1:2101007/71‑1 (MQ=255) gTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTAtttt < 1:276620/56‑1 (MQ=255) tGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCa < 1:351519/41‑1 (MQ=255) agATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCa > 1:4148728‑M2/3‑56 (MQ=255) gATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCATTCGCGCTGTGAATaa < 1:4270805‑M2/70‑1 (MQ=255) aTAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTAttttt < 1:195968/52‑1 (MQ=255) | GAGCGGAAGAGGAATTTTATAAATAGACATCTGAAGACGCTCTCTGAACGTTACAGGGTGATCAGTGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCATTCGCGCTGTGAATAA > minE/391437‑391575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |