| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 432867 | 85 (1.150) | 7 (0.100) | 3/92 | NT | 7.3% | coding (1233/1407 nt) | ybfM | predicted outer membrane porin |
| ? | minE | = 432885 | 99 (1.460) | coding (1251/1407 nt) | ybfM | predicted outer membrane porin | |||||
Only 100 of 114 total aligned reads displayed.
CGACCTGGCAGAGCAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCATTTCACCGAA > minE/432797‑432933 | cGACCTGGCAGAGCAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTG < 1:747606‑M1/71‑1 (MQ=255) ggCAGAGCAATCCGTATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTG < 1:167886‑M1/65‑1 (MQ=255) ggCAGAGCAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTG < 1:364549‑M1/65‑1 (MQ=255) gCAGAGCAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCgg > 1:623753/1‑71 (MQ=255) agagCAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGaatggta > 1:1208666‑M1/1‑62 (MQ=255) agagCAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGaatggta > 1:462956‑M1/1‑62 (MQ=255) gagCAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTG < 1:3687377‑M1/61‑1 (MQ=255) acAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCtat < 1:2237462/70‑1 (MQ=255) cAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCtata > 1:4501736/1‑71 (MQ=255) cAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCtat > 1:2480723/1‑70 (MQ=255) aTCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATAc > 1:201397/1‑70 (MQ=255) aTCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATAc > 1:436128/1‑70 (MQ=255) tCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCa > 1:627856/1‑71 (MQ=255) tCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCa > 1:3112523/1‑71 (MQ=255) gATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCAtt > 1:4626379/1‑69 (MQ=255) cGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGAc < 1:3885017/71‑1 (MQ=255) tactacGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGaatggtatagaccgcatccaggctgt < 1:3846455‑M1/71‑27 (MQ=255) tactacGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACgg < 1:2672724/71‑1 (MQ=255) actacGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGt > 1:4746197/1‑71 (MQ=255) actacGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGt > 1:4478441/1‑71 (MQ=255) ctacGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTc > 1:1347377/1‑71 (MQ=255) cGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTca < 1:3440178‑M2/60‑3 (MQ=255) cGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTca < 1:2166677‑M2/60‑3 (MQ=255) aCAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCa > 1:3712934/1‑54 (MQ=255) cAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACgg > 1:1279973/1‑63 (MQ=255) cAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGcc > 1:4233124/1‑70 (MQ=255) ataaaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCaa < 1:4554800/69‑1 (MQ=255) aaaaaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCgg < 1:1220672/43‑1 (MQ=255) aaaaaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCaa < 1:1999558/71‑1 (MQ=255) aaaaaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCa > 1:967998/1‑70 (MQ=255) aaaaaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCa > 1:4755004/1‑70 (MQ=255) aaaaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCaa < 1:907241/70‑1 (MQ=255) aaaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCtata > 1:3561061/1‑47 (MQ=255) aaaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAg > 1:2119947/1‑71 (MQ=255) aaaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAg > 1:2993143/1‑71 (MQ=255) aaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAgg < 1:4421310/71‑1 (MQ=255) aaCCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGGCGCGCCAAAgg < 1:4076049/71‑1 (MQ=255) ccGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCg > 1:3308489/1‑37 (MQ=255) ccGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCg > 1:1574486/1‑37 (MQ=255) ccGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCg > 1:2399747/1‑37 (MQ=255) ccGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCg > 1:4738747/1‑37 (MQ=255) cGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCAc < 1:4131477/71‑1 (MQ=255) cGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCAc < 1:4126149/71‑1 (MQ=255) gACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGa < 1:442012/71‑1 (MQ=255) aCTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGAt < 1:3189765/71‑1 (MQ=255) ttGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCaa < 1:169270/58‑1 (MQ=255) tGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCaaa > 1:3348657/1‑58 (MQ=255) tGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCaaa > 1:1557734/1‑58 (MQ=255) gAAGAGTCTGCCTACAGCCTTGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCa > 1:1805748/1‑70 (MQ=255) gAAGAGTCTGCCTACAGCCTGaatggtatagaccgcatcc < 1:534050‑M1/40‑20 (MQ=255) gAAGAGTCTGCCTACAGCCTGaatggtatagaccgcatcc < 1:3544843‑M1/40‑20 (MQ=255) gAAGAGTCTGCCTACAGCCTGaatggtatagaccgcatcc < 1:219779‑M1/40‑20 (MQ=255) gAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCa > 1:125398/1‑70 (MQ=255) gAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCa > 1:548079/1‑70 (MQ=255) gAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCa > 1:266854/1‑70 (MQ=255) gAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCa > 1:3066559/1‑70 (MQ=255) gagTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACt < 1:1003684/71‑1 (MQ=255) gagTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACt < 1:1354669/71‑1 (MQ=255) gagTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACt < 1:2140123/71‑1 (MQ=255) tGCCTACAGCCTGGATGCGGTCTATACCATTCAGGTCGGTCGCGCCAAAGGCACGATGTTCAAACTGCAtt > 1:4388973/1‑71 (MQ=255) tGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCaaa > 1:2170899/1‑49 (MQ=255) tGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCaaa > 1:524297/1‑49 (MQ=255) tGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCaaa > 1:4517626/1‑49 (MQ=255) tGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAtt > 1:1002949/1‑71 (MQ=255) tGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAtt > 1:816646/1‑71 (MQ=255) tGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAtt > 1:559505/1‑71 (MQ=255) tGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAtt > 1:2162073/1‑71 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAttt > 1:2876282/1‑70 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAttt < 1:568031/70‑1 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAttt < 1:1762450/70‑1 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAttt < 1:381740/70‑1 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAttt > 1:2913631/1‑70 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAttt < 1:24736/70‑1 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAttt > 1:2588699/1‑70 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAttt < 1:3267951/70‑1 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAttt < 1:387391/70‑1 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAt < 1:3748736/68‑1 (MQ=255) ccTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAt < 1:3459015/68‑1 (MQ=255) ccTACAGCCTGGATGCGGACTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCAtt > 1:188278/1‑69 (MQ=255) tACAGCCTGGATGCGGTCTATACCATTCAGGACGGTcgcg < 1:346538/40‑1 (MQ=255) tACAGCCTGGATGCGGTCTATACCATTCAGGACGGTcgcg < 1:1409665/40‑1 (MQ=255) tACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCAc < 1:4584231/50‑1 (MQ=255) tACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCAc < 1:1273557/50‑1 (MQ=255) aCAGCCTGGATGCGGTCTATACCATTcaggctgtaggcagactcttcaatagtccggtttttgtcgtagta < 1:3846455‑M2/71‑46 (MQ=255) cAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCATTTCAcc < 1:782006/70‑1 (MQ=255) cAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCATTTCAcc > 1:773423/1‑70 (MQ=255) cAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCATTTCAcc > 1:4288324/1‑70 (MQ=255) ccTGaatggtatagaccgcatccaggctgtaggcagactcttcaatagtccggtttttgtcgtagtac < 1:644489‑M1/68‑65 (MQ=255) tGaatggtatagaccgcatccaggctgtaggcagactcttcaatagtccggtttttgtcg < 1:2166677‑M1/60‑59 (MQ=255) tGaatggtatagaccgcatccaggctgtaggcagactcttcaatagtccggtttttgtcg < 1:3440178‑M1/60‑59 (MQ=255) tGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTg < 1:2522619/56‑1 (MQ=255) tGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTg < 1:562447/56‑1 (MQ=255) tGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCATTTCACCGaa < 1:4737386/68‑1 (MQ=255) tGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCATTTCACCGaa < 1:910081/68‑1 (MQ=255) tGGATGCGGTCTATACAATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCATTTCACCGaa < 1:4336629/68‑1 (MQ=255) ggATGCGGTCTATACCATTcaggctgtaggcagactcttc < 1:534050‑M2/40‑22 (MQ=255) ggATGCGGTCTATACCATTcaggctgtaggcagactcttc < 1:1763199‑M2/40‑22 (MQ=255) ggATGCGGTCTATACCATTcaggctgtaggcagactcttc < 1:3544843‑M2/40‑22 (MQ=255) ggATGCGGTCTATACCATTcaggctgtaggcagactcttc < 1:219779‑M2/40‑22 (MQ=255) ggATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTg < 1:3426618/55‑1 (MQ=255) | CGACCTGGCAGAGCAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCATTTCACCGAA > minE/432797‑432933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |