New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE 202689 =0 (0.000)8 (0.140)
+GGAGCAAGCTC
3/78 NT 100% noncoding (94/1542 nt) rrsH 16S ribosomal RNA
?minE = 2763338 0 (0.000)noncoding (76/1542 nt) rrsE 16S ribosomal RNA

GCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGG  >  minE/2763304‑2763375
                                  |                                     
gcATGCTTTACACATGCAAGTCGAACGGTAACAGGgagcttgctccgctgacgagtggcgaacgggtgagt   >  1:3655334‑M2/1‑35 (MQ=255)
gcATGCTTTACACATGCAAGTCGAACGGTAACAGGgagcttgctccgctgacgagtggcgaacgggtgagt   >  1:3774788‑M2/1‑35 (MQ=255)
           acaTGCAAGTCGAACGGTAACAGGgagcttgctccgctgacgagtggcgaacgggtgagta  <  1:1081818‑M2/61‑38 (MQ=255)
           acaTGCAAGTCGAACGGTAACAGGgagcttgctccgctgacgagtggcgaacgggtgagta  <  1:1832090‑M2/61‑38 (MQ=255)
           acaTGCAAGTCGAACGGTAACAGGgagcttgctccgctgacgagtggcgaacgggtgagta  <  1:4130444‑M2/61‑38 (MQ=255)
           acaTGCAAGTCGAACGGTAACAGGgagcttgctccgctgacgagtggcgaacgggtgagta  <  1:4582169‑M2/61‑38 (MQ=255)
             aTGCAAGTCGAACGGTAACAGGgagcttgctccgctgacgagtggcgaacg          <  1:3652905‑M2/51‑30 (MQ=255)
                           ttaACAGGgagcttgctccgctgacgagtggcgaacgggtgagt   >  1:2457825‑M2/2‑8 (MQ=255)
                                  |                                     
GCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGG  >  minE/2763304‑2763375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.