| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 18241 | 57 (1.100) | 25 (0.480) | 21/102 | NT | 37.6% | intergenic (+80/+252) | nhaR/rpsT | DNA‑binding transcriptional activator/30S ribosomal subunit protein S20 |
| ? | minE | 1502766 = | 26 (0.500) | intergenic (‑139/‑781) | lrhA/yfbQ | DNA‑binding transcriptional repressor/predicted aminotransferase | |||||
TTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/18186‑18241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCG > minE/1502766‑1502833 cTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAA < 1:2012608/60‑1 ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTC > 1:3507293/1‑71 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGT > 1:3126993/1‑70 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAG > 1:3548392/1‑52 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTAT < 1:175097/71‑1 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCG > 1:583911/1‑52 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAA < 1:2916204/48‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATA < 1:3267544/71‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAA > 1:1579007/1‑48 AAACACCATCATACACTAAATCAGTAAGTTGGAAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATA < 1:3426067/71‑1 ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAAT < 1:3921690/71‑1 TCATACACTAAATCAGTAAGTTGGCAGCATTACCGAAAt < 1:1588538/39‑2 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTA < 1:2039990/61‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAA < 1:1798875/37‑1 TACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAG < 1:2907369/70‑1 ACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAG > 1:3415144/1‑67 CTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAT < 1:1402525/71‑1 TAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAT > 1:936186/1‑70 AATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCA > 1:3022589/1‑70 TCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCA > 1:2277744/1‑68 AGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGA < 1:3437440/70‑1 TTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCAC < 1:1904317/61‑1 TGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATAT > 1:2041689/1‑69 GGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAAT > 1:2942850/1‑43 CAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTT > 1:3299848/1‑69 CAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGA < 1:2754042/53‑1 GCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGG < 1:2574863/71‑1 ATCACCAAAAAAGCGACTCACATTGTTCCGTTATA < 1:3596407/35‑1 ATCACCAAAAAAGCGACTCACATTGTTCCGTTATA < 1:198210/35‑1 ACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCG < 1:383395/71‑1 CAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTC < 1:385244/61‑1 TTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/18186‑18241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCG > minE/1502766‑1502833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |