| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 18241 | 57 (1.100) | 25 (0.480) | 21/102 | NT | 37.6% | intergenic (+80/+252) | nhaR/rpsT | DNA‑binding transcriptional activator/30S ribosomal subunit protein S20 |
| ? | minE | 1502766 = | 26 (0.500) | intergenic (‑139/‑781) | lrhA/yfbQ | DNA‑binding transcriptional repressor/predicted aminotransferase | |||||
Only 100 of 106 total aligned reads displayed.
CCCCCAAAGTTAAGGTTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTG > minE/18171‑18309 | cccccAAAGTTAAGGTTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacc > 1:1628956/1‑71 (MQ=255) ccccAAAGTTAAGGTTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacc < 1:692498/70‑1 (MQ=255) cAAAGTTAAGGTTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacctacc > 1:1017342/1‑71 (MQ=255) aaaGTTAAGGTTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacctacct > 1:745165/1‑71 (MQ=255) aaGGTTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTc > 1:1997161/1‑66 (MQ=255) aaGGTTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTc > 1:2567358/1‑66 (MQ=255) aaGGTTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTc > 1:3469841/1‑66 (MQ=255) cactGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAtgtg < 1:2003940/67‑1 (MQ=255) ctgGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaa < 1:2012608‑M1/60‑6 (MQ=255) tGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCaccga > 1:2930207/1‑55 (MQ=255) tGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTAt > 1:777246/1‑70 (MQ=255) gAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTc > 1:3309153/1‑59 (MQ=255) gAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTc > 1:3811267/1‑59 (MQ=255) aGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTc < 1:3164604/58‑1 (MQ=255) aGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATgtgt < 1:2493454/65‑1 (MQ=255) aGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATcac > 1:1592475/1‑70 (MQ=255) cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacct < 1:1378766/51‑1 (MQ=255) cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt < 1:3257493/59‑1 (MQ=255) cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATgtgt > 1:3071548/1‑63 (MQ=255) aCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttc > 1:3507293‑M1/1‑49 (MQ=255) ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacc < 1:3269883/48‑1 (MQ=255) ccTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCacc < 1:895431/48‑1 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATc > 1:2302521/1‑71 (MQ=255) cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttccgt > 1:3126993‑M1/1‑45 (MQ=255) cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaaag > 1:3548392‑M1/1‑45 (MQ=255) cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCa > 1:1078106/1‑71 (MQ=255) cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCa > 1:2014389/1‑71 (MQ=255) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCacc < 1:1933752/44‑1 (MQ=255) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt < 1:3162340/53‑1 (MQ=255) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt < 1:1362888/53‑1 (MQ=255) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATcc < 1:1135225/69‑1 (MQ=255) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCa > 1:1000743/1‑70 (MQ=255) aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCa > 1:3181652/1‑70 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCacc < 1:113842/43‑1 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttccgttat < 1:175097‑M1/71‑29 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaaagcg > 1:583911‑M1/1‑43 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaa < 1:2916204‑M1/48‑6 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCat > 1:2034874/1‑70 (MQ=255) aaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCaccga < 1:1744828/44‑3 (MQ=255) aaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttccgttata < 1:3267544‑M1/71‑30 (MQ=255) aaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaaa > 1:1579007‑M1/1‑42 (MQ=255) aaaCACCATCATACACTAAATCAGTAAGTTGGAAGCATCACCaaaaaagcgactcacattgttccgttata < 1:3426067‑M1/71‑30 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATc > 1:2308723/1‑57 (MQ=255) tcacCATCATACACTAAATCAGTAAGTTGGCAGCATTaccg > 1:2169833/2‑40 (MQ=255) acacCATCATACACTAAATCAGTAAGTTGGCAGCATCacc > 1:2021259/1‑40 (MQ=255) acacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttccgttataat < 1:3921690‑M1/71‑32 (MQ=255) cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCt < 1:2413946/71‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCacctg > 1:3513258/1‑37 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATgtgt < 1:3004119/49‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTtg < 1:774739/71‑1 (MQ=255) atcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt < 1:2729863/44‑1 (MQ=255) atcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAt < 1:2920207/44‑1 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATTACCgaaat < 1:1588538‑M1/39‑6 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTtgtg < 1:2896538/71‑1 (MQ=255) tcatACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTtgtg < 1:2413757/71‑1 (MQ=255) atACACTAAATCAGTAAGTTGGCAGCATCACCaaaaa < 1:1798875‑M1/37‑6 (MQ=255) atACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTgg < 1:2126846/70‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttccgttataatgcctgaag < 1:2907369‑M1/70‑40 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAAtg < 1:415415/41‑1 (MQ=255) tACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTgggg < 1:3839413/71‑1 (MQ=255) acacTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTgggg > 1:235662/1‑70 (MQ=255) cacTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCt < 1:805121/61‑1 (MQ=255) acTAAATCAGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttccgttataatgcctgaag > 1:3415144‑M1/1‑28 (MQ=255) cTAAATCAGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttccgttataatgcctgaagtagat < 1:1402525‑M1/71‑45 (MQ=255) tAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTc > 1:1735418/1‑71 (MQ=255) aaaTCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATca < 1:279258/42‑1 (MQ=255) aaaTCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCt > 1:1122140/1‑71 (MQ=255) aaaTCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCt > 1:733884/1‑71 (MQ=255) aaTCAGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttccgttataatgcctgaagtagatca > 1:3022589‑M1/1‑24 (MQ=255) aaTCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGt < 1:2016404/68‑1 (MQ=255) aaTCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTc < 1:2008219/69‑1 (MQ=255) tCAGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttccgttataatgcctgaagtagatca > 1:2277744‑M1/1‑22 (MQ=255) tCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTg > 1:2853272/1‑69 (MQ=255) tCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTg > 1:3563458/1‑69 (MQ=255) aGTAAGTTGGCAGCATCACCaaaaaagcgactcacattgttccgttataatgcctgaagtagatcacaga < 1:3437440‑M1/70‑51 (MQ=255) gTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGAt > 1:1512919/1‑71 (MQ=255) tAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTTTTTGTGGGGGAGTCTGGAGAtt > 1:1115783/1‑71 (MQ=255) aGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCtt > 1:496503/1‑49 (MQ=255) aGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCtt > 1:341837/1‑49 (MQ=255) aGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTgggg > 1:1898545/1‑56 (MQ=255) aGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGa < 1:1676245/71‑1 (MQ=255) gTTGCCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTgg < 1:3839669/53‑1 (MQ=255) ttGGCAGCATCACCaaaaaagcgactcacattgttccgttataatgcctgaagtagatcac < 1:1904317‑M1/61‑48 (MQ=255) tGGCAGCATCACCaaaaaagcgactcacattgttccgttataatgcctgaagtagatcacagaatatat > 1:2041689‑M1/1‑13 (MQ=255) ggCAGCATCACCaaaaaagcgactcacattgttccgttataat > 1:2942850‑M1/1‑12 (MQ=255) ggCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTa < 1:3145521/70‑1 (MQ=255) cagcaTCACCaaaaaagcgactcacattgttccgttataatgcctgaagtagatcacagaatatatctt > 1:3299848‑M1/1‑10 (MQ=255) cagcaTCACCaaaaaagcgactcacattgttccgttataatgcctgaagtaga < 1:2754042‑M1/53‑44 (MQ=255) agcaTCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTggg > 1:3586435/1‑48 (MQ=255) gcaTCACCaaaaaagcgactcacattgttccgttataatgcctgaagtagatcacagaatatatcttcagg < 1:2574863‑M1/71‑64 (MQ=255) gcaTCACCTACCTCAATGTGTATCACAATATCCATATTCtt > 1:500657/1‑41 (MQ=255) caTCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGatat > 1:2593509/1‑70 (MQ=255) aTCACCaaaaaagcgactcacattgttccgttata < 1:3596407‑M1/35‑30 (MQ=255) aTCACCaaaaaagcgactcacattgttccgttata < 1:198210‑M1/35‑30 (MQ=255) tCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTgg < 1:2916567/53‑1 (MQ=255) cACCTACCTCAATGTGTATCACAATATCCATATTCttt < 1:1427247/38‑1 (MQ=255) acctacctCAATGTGTATCACAATATCCATATTCTTTGTggg > 1:2297603/1‑42 (MQ=255) acctacctCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTg > 1:1515501/1‑71 (MQ=255) aCCaaaaaagcgactcacattgttccgttataatgcctgaagtagatcacagaatatatcttcagggatcg < 1:383395‑M1/71‑69 (MQ=255) caaaaaagcgactcacattgttccgttataatgcctgaagtagatcacagaatatatcttc < 1:385244‑M1/61‑61 (MQ=255) | CCCCCAAAGTTAAGGTTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTG > minE/18171‑18309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |