New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | 126195 = | 45 (0.870) | 3 (0.060) | 3/96 | NT | 7.1% | coding (25/537 nt) | hpt | hypoxanthine phosphoribosyltransferase |
? | minE | 126212 = | 36 (0.740) | coding (42/537 nt) | hpt | hypoxanthine phosphoribosyltransferase |
GCTGTCTTTGTAACGCTCAGTAATCTGACGACCCAGTTCGGCGATACGCGCTTTAATCTCCGCTTCGGGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/126266‑126195 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGCGGCAGCGATATGG > minE/126212‑126279 GCTGTCTTTGTAACGCTCAGTAATCTGACGACCCAGTTCGGCGATACGCGCTTTAATCTCCGCTTCGGGG < 1:1789359/70‑1 TGTCTTTGTAACGCTCAGTAATCTGACGACCCAGTTCGGCGATACGCGCTTTAATCTCCGCTTCGGGGAT > 1:2016886/1‑70 ACGCTCAGTAATCTGACGACCCAGTTCGGCGATACGCGCTTTAATCTCCGCTTCGGGGA < 1:13286/59‑1 TGACGACCCAGTTCGGCGATACGCGCTTTAATCTCCGCTTCGGGGA < 1:471106/46‑1 GTTCGGCGATACGCGCTTTAATCTCCGCTTCGGGGAT < 1:3183000/37‑1 AATCTCCGCTTCGGGGATTAAAGCGCGTATCGCCGAAC < 1:2199954/38‑1 ATCTCCGCTTCGGGGATTAAAGCGCGTATCGCCGAACTG < 1:941840/39‑1 TCTCCGCTTCGGGGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATT > 1:1543487/1‑50 ATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGCGGCAGCGATATGG < 1:3851374/70‑1 GCTGTCTTTGTAACGCTCAGTAATCTGACGACCCAGTTCGGCGATACGCGCTTTAATCTCCGCTTCGGGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/126266‑126195 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGCGGCAGCGATATGG > minE/126212‑126279 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |