| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 126195 = | 45 (0.870) | 3 (0.060) | 3/96 | NT | 7.1% | coding (25/537 nt) | hpt | hypoxanthine phosphoribosyltransferase |
| ? | minE | 126212 = | 36 (0.740) | coding (42/537 nt) | hpt | hypoxanthine phosphoribosyltransferase | |||||
TTTGTTTTTAAATCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGCGGCAGCGATATGG > minE/126143‑126279 | tttGTTTTTAAATCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTa < 1:3512675/71‑1 (MQ=255) gTTTTTAAATCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTaaa < 1:1005367/70‑1 (MQ=255) gTTTTTAAATCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAg > 1:1223408/1‑71 (MQ=255) tttttAAATCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAgc < 1:3167644/71‑1 (MQ=255) tttttAAATCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAg < 1:3595374/70‑1 (MQ=255) tttAAATCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTa < 1:1155130/65‑1 (MQ=255) tttAAATCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTa < 1:2855620/65‑1 (MQ=255) tAAATCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGcgcg < 1:1025018/70‑1 (MQ=255) aaaTCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGt < 1:511534/70‑1 (MQ=255) tCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAgcgc > 1:2861662/1‑65 (MQ=255) tGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGa < 1:3826495/70‑1 (MQ=255) gTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACt < 1:2262642/71‑1 (MQ=255) gTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACt < 1:772278/71‑1 (MQ=255) gTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACt < 1:192998/71‑1 (MQ=255) agagATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACt > 1:913928/1‑68 (MQ=255) gagaTATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTggg < 1:158619/70‑1 (MQ=255) gagaTATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTggg < 1:3606948/70‑1 (MQ=255) gaTATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGgtcg < 1:773907/71‑1 (MQ=255) gaTATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGgtcg < 1:1654295/71‑1 (MQ=255) tGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGaa > 1:98534/1‑59 (MQ=255) tGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCa < 1:717600/70‑1 (MQ=255) tGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCa < 1:1323540/70‑1 (MQ=255) gAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGgtcgt > 1:2961119/1‑67 (MQ=255) gttcggcgatacgcgctttaATCCCCGAAGCGGAGAtt < 1:2199954‑M1/18‑1 (MQ=255) aaCATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAg < 1:1679156/68‑1 (MQ=255) aCATACTGTAGAAGTAATGATCCCCGAAGCGGAGAtt > 1:1441426/1‑37 (MQ=255) aCATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCa > 1:656602/1‑66 (MQ=255) tGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGcgcg < 1:323764/39‑1 (MQ=255) tGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGAt < 1:3317542/63‑1 (MQ=255) tAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCg < 1:757570/70‑1 (MQ=255) tAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCg < 1:997609/70‑1 (MQ=255) aGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAg > 1:2275791/1‑67 (MQ=255) gAAGTAATGATCCCCGAAGCGGAGATTAAAGcgcg > 1:3039430/1‑35 (MQ=255) aGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACa < 1:3479819/71‑1 (MQ=255) aaTGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGgtcgt > 1:665040/1‑49 (MQ=255) aaTGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACaaa < 1:229390/70‑1 (MQ=255) aaTGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACa > 1:2281435/1‑68 (MQ=255) aTGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCa < 1:1881042/50‑1 (MQ=255) aTGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTAc > 1:3940721/1‑56 (MQ=255) aTGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGa > 1:2978724/1‑59 (MQ=255) aTGATCCCCGAAGCGGAGATAAAAGCGCGTATCGCCGAACTGGgtc > 1:774119/1‑46 (MQ=255) aTGATCCCCGAAGCAGAGATTAAAGCGCGTATCGCCGAACTGGgtc > 1:408409/1‑46 (MQ=255) aatctccgcttcggggatTAAAGCGCGTATCGCCGAAc < 1:2199954‑M2/20‑1 (MQ=255) atctccgcttcggggatTAAAGCGCGTATCGCCGAACTg < 1:941840‑M2/22‑1 (MQ=255) ATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAAc < 1:3183000‑M1/37‑1 (MQ=255) ATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACa > 1:2016886‑M1/1‑70 (MQ=255) tctccgcttcggggatTAAAGCGCGTATCGCCGAACTGGGTCGTCAGAtt > 1:1543487‑M2/17‑50 (MQ=255) TCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCa < 1:471106‑M1/46‑1 (MQ=255) TCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGt < 1:13286‑M1/59‑1 (MQ=255) CCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGc < 1:1789359‑M1/70‑1 (MQ=255) ccGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTa < 1:3890425/48‑1 (MQ=255) gAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGt > 1:2433879/1‑54 (MQ=255) cGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGCGGCAGCGa > 1:2550201/1‑70 (MQ=255) ggAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACt < 1:714489/43‑1 (MQ=255) agaTTAAAGCGCGTATCGCCGAACTGGGTCGTCAGAt < 1:2666093/37‑1 (MQ=255) agaTTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGCGGCAGCGATATg > 1:2467052/1‑71 (MQ=255) atTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGCGGCAGCGATATgg < 1:3851374‑M2/68‑1 (MQ=255) | TTTGTTTTTAAATCATATGGTTAGAGATATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGCGGCAGCGATATGG > minE/126143‑126279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |