New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | 139150 = | 50 (0.960) | 5 (0.100) | 3/102 | NT | 8.3% | coding (1017/2598 nt) | htrE | predicted outer membrane usher protein |
? | minE | 139171 = | 61 (1.180) | coding (996/2598 nt) | htrE | predicted outer membrane usher protein |
TATTGTTACCATCGAAGAATCCGATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/139177‑139150 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCT > minE/139171‑139228 TATTGTTACCATCGAAGAATCCGATGGCAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATC > 1:1962233/1‑70 TTACCATCGAAGAATCCGATGGCAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATG < 1:1270731/69‑1 TTACCATCGAAGAATCCGATGGCAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATG < 1:3566695/69‑1 TTACCATCGAAGAATCCGATGGCAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATG < 1:3571184/69‑1 AGAATCCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCT < 1:2696007/71‑1 TATTGTTACCATCGAAGAATCCGATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/139177‑139150 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGACGAAAGCGCCT > minE/139171‑139228 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |