| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 139150 = | 50 (0.960) | 5 (0.100) | 3/102 | NT | 8.3% | coding (1017/2598 nt) | htrE | predicted outer membrane usher protein |
| ? | minE | 139171 = | 61 (1.180) | coding (996/2598 nt) | htrE | predicted outer membrane usher protein | |||||
CAACGTCCAACGCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGA > minE/139082‑139217 | cAACGTCCAACGCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGc > 1:3492705/1‑70 (MQ=255)cAACGTCCAACGCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGc > 1:3634088/1‑70 (MQ=255)cAACGTCCAACGCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGc > 1:2168859/1‑70 (MQ=255) aaCGTCCAACGCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCa < 1:2275070/71‑1 (MQ=255) aaCGTCCAACGCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCa < 1:205406/71‑1 (MQ=255) aCGTCCAACGCCAGGGCGTAACATTTGAACAATGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCAt > 1:3532344/1‑71 (MQ=255) aCGTCCAACGCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCa > 1:3510822/1‑70 (MQ=255) aCGTCCAACGCCAGGGAGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCAt > 1:1830309/1‑71 (MQ=255) cGTCCAACGCCAGGGCGTAACATTTGAA‑AACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCg < 1:135445/71‑1 (MQ=255) aaCGCCAGTGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGAtt > 1:1474310/1‑71 (MQ=255) cGCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGAttct < 1:743696/71‑1 (MQ=255) cGCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGAttct > 1:685374/1‑71 (MQ=255) aggcgctttcgtcattgatgatctgagtccgtcagggtacggcagcgatcttattgttACCATCGGAttct < 1:2696007‑M1/13‑1 (MQ=255) gCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGAttct < 1:2143231/70‑1 (MQ=255) cAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCg < 1:2125266/71‑1 (MQ=255) aGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGa < 1:1597220/71‑1 (MQ=255) aGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGa < 1:738206/71‑1 (MQ=255) ggCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATg < 1:1191743/71‑1 (MQ=255) cGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATgg > 1:992401/1‑70 (MQ=255) cGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGt < 1:810763/71‑1 (MQ=255) cattgatgatctgagtccgtcagggtacggcagcgatcttattgttGCCATCGGATTCTTCGATGGTaa < 1:3566695‑M1/23‑1 (MQ=255) cattgatgatctgagtccgtcagggtacggcagcgatcttattgttGCCATCGGATTCTTCGATGGTaa < 1:3571184‑M1/23‑1 (MQ=255) cattgatgatctgagtccgtcagggtacggcagcgatcttattgttGCCATCGGATTCTTCGATGGTaa < 1:1270731‑M1/23‑1 (MQ=255) aTTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAAt < 1:2345916/71‑1 (MQ=255) aTTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAAt < 1:142098/71‑1 (MQ=255) tttGAACAACGTATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATa < 1:3936979/71‑1 (MQ=255) tttGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCAt < 1:1750772/48‑1 (MQ=255) tttGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCAt < 1:1479922/48‑1 (MQ=255) ttGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAg > 1:942213/1‑43 (MQ=255) ttGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAAt > 1:3034008/1‑69 (MQ=255) gatgatctgagtccgtcagggtacggcagcgatcttattgttGCCATCGGATTCTTCGATGGTAACAATa > 1:1962233‑M1/43‑70 (MQ=255) tGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAAt > 1:2999517/1‑68 (MQ=255) tGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAAt > 1:1165260/1‑68 (MQ=255) gAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAAt > 1:3501983/1‑67 (MQ=255) caacGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCg < 1:2797486/71‑1 (MQ=255) cGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGc > 1:1905404/1‑36 (MQ=255) cGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGAttctt > 1:703504/1‑48 (MQ=255) cGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGAttctt > 1:3813492/1‑48 (MQ=255) cGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTg > 1:308270/1‑71 (MQ=255) aTGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCg > 1:1973521/1‑71 (MQ=255) tGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCg < 1:2281601/37‑1 (MQ=255) gagaAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTa > 1:2516066/1‑71 (MQ=255) gagaAAGGTTGCGACAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTa > 1:1127128/1‑71 (MQ=255) aaGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCt < 1:1492564/71‑1 (MQ=255) aGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATaa > 1:1081336/1‑53 (MQ=255) aGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATaa > 1:2644176/1‑53 (MQ=255) gCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGa > 1:2433448/1‑71 (MQ=255) cGAGACTGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACg < 1:3087853/68‑1 (MQ=255) agaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:3308082/1‑70 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTa > 1:947934/1‑37 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGt < 1:1873902/56‑1 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:3337104/1‑69 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:1521334/1‑69 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:2350649/1‑69 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:2341785/1‑69 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:2337308/1‑69 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:2307656/1‑69 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:675735/1‑69 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:477798/1‑69 (MQ=255) gaATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCATACCCTGAc > 1:2625535/1‑64 (MQ=255) aaTGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCg < 1:1021572/54‑1 (MQ=255) aaTGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCg < 1:2261178/54‑1 (MQ=255) aaTGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACt > 1:3751036/1‑68 (MQ=255) gTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATa < 1:2223097/39‑1 (MQ=255) gTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGat > 1:559341/1‑70 (MQ=255) tCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAg > 1:2142937/1‑40 (MQ=255) cggCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGGTGCCGTAccc < 1:2301151/52‑1 (MQ=255) ttGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAAt > 1:2508444/1‑70 (MQ=255) tGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATg < 1:621806/70‑1 (MQ=255) tGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGa > 1:1009890/1‑71 (MQ=255) tGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGa > 1:1429824/1‑71 (MQ=255) gAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATg < 1:1954781/69‑1 (MQ=255) aGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGAc < 1:2597314/54‑1 (MQ=255) aGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTc > 1:3572554/1‑56 (MQ=255) | CAACGTCCAACGCCAGGGCGTAACATTTGAACAACGGATGAGAAAGGTTGCGAGAATGTCCGCTTTGAGCCATCGGATTCTTCGATGGTAACAATAAGATCGCTGCCGTACCCTGACGGACTCAGATCATCAATGA > minE/139082‑139217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |