New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	222160 =	61 (1.180)	5 (0.110)	3/92	NT	8.5%	intergenic (‑33/‑207)	fadE/lpcA	acyl coenzyme A dehydrogenase/D‑sedoheptulose 7‑phosphate isomerase
	?	minE	222187 =	52 (1.110)					intergenic (‑60/‑180)	fadE/lpcA	acyl coenzyme A dehydrogenase/D‑sedoheptulose 7‑phosphate isomerase

GCTTTGTTGTAATTATATTGTAAACATATTGCTAAATGTTTTTACATCCACTACAACCATATCATCACAAGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/222233‑222160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtggATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTGCTGTTTTTAT  >  minE/222187‑222254                                                                                                                                                GCTTTGTTGTAATTATATTGTAAACATATTGCTAAATGTTTTTACATCCACTACAACCATATCATCACAA                                                                          <  1:2260498/70‑1    TTGTTGTAATTATATTGTAAACATATTGCTAAATGTTTTTACATCCACTACAACCATATCATCACAAGTGG                                                                      >  1:3825483/1‑71     TGTTGTAATTATATTGTAAACATATTGCTAAATGTTTTTACATCCACTACAACCATATCATCACAAGTG                                                                       <  1:1836108/69‑1                                   AATGTTTTTACATCCACTACAACCATATCATCACAAGT                                                                        >  1:2260399/1‑38                                              ATCCACTACAACCATATCATCACAAGTGGATGTAAAAACATTTAG‑AATATGTT                                             <  1:2847476/53‑1                                                CCACTACAACCATATCATCACAAGTGGATGTAAAAACATTTAGCAATATGTTTA                                           >  1:2225417/1‑54                                                CCACTACAACCATATCATCACAAGTGGATGTAAAAACATTTAGCAATATGTTTA                                           >  1:2754323/1‑54                                                  ACTACAACCATATCATCACAAGTGGATGTAAAAACAT                                                          <  1:624518/37‑1                                                  ACTACAACCATATCATCACAAGTGGATGTAAAAACAT                                                          <  1:915489/37‑1                                                                       GTGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTGCTGTTTTTA   <  1:3079890/71‑1                                                                        TGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTGCTGTTTTTAT  <  1:1349088/71‑1                                                                        TGGATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTG            >  1:625504/1‑61                                                                                                                                                GCTTTGTTGTAATTATATTGTAAACATATTGCTAAATGTTTTTACATCCACTACAACCATATCATCACAAGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/222233‑222160 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtggATGTAAAAACATTTAGCAATATGTTTACAATATAATTACAACAAAGCTCACATTGTTGCTGTTTTTAT  >  minE/222187‑222254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.