| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 299536 | 56 (1.080) | 5 (0.100) | 3/94 | NT | 8.8% | coding (432/1782 nt) | mdlB | fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily |
| ? | minE | = 299550 | 52 (1.090) | coding (446/1782 nt) | mdlB | fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily | |||||
GTCGGGCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/299465‑299536‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaCTGCGCAGGACAGTTGCCACTACGGTAACGTAGAGATCGCGGATCACTTCAGTGTCATTAGTGACGCGGG < minE/299550‑299481 GTCGGGCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGC < 1:3666781/71‑1 TCGGGCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCA < 1:1717842/71‑1 GATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGC < 1:459983/60‑1 CCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCACTGCGCAGGACAGTT > 1:1323780/1‑71 CCCGCGTCACTAATGACACTGAAGTGAT‑‑GCGATCTCTACGTTACCGTAGTGGCACTGCGCAGGACAGTTGC > 1:3094332/1‑71 CGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCACTGCGCAGGACAGTTGC < 1:2526947/71‑1 TGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGC < 1:955637/36‑1 AAGTGATCCGCGATCTCTACGTTACCGTAGTGGCACTGCGCAGGA > 1:2048865/1‑45 AAGTGATCCGCGATCTCTACGTTACCGTAGTGGCACTGCGCAGGA > 1:946123/1‑45 GGCACTGCGCAGGACAGTTGCCACTACGGTAACGTAGAGATCGCGGATCACTTCAGT > 1:934838/1‑57 GCACTGCGCAGGACAGTTGCCACTACGGTAACGTAGAGATCGCGGATCACTTCAGTGTCATTAGTGACGCG > 1:755213/1‑71 CACTGCGCAGGACAGTTGCCACTACGGTAACGTAGAGATCGCGGATCACTTCAGTGTCATTA < 1:110944/62‑1 ACTGCGCAGGACAGTTGCCACTACGGTAACGTAGAGATCGCGGATCACTTCAGTGTCATTAGTGACGCGGG < 1:2482831/71‑1 GTCGGGCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/299465‑299536‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaCTGCGCAGGACAGTTGCCACTACGGTAACGTAGAGATCGCGGATCACTTCAGTGTCATTAGTGACGCGGG < minE/299550‑299481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |