| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 299536 | 56 (1.080) | 5 (0.100) | 3/94 | NT | 8.8% | coding (432/1782 nt) | mdlB | fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily |
| ? | minE | = 299550 | 52 (1.090) | coding (446/1782 nt) | mdlB | fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily | |||||
TCGGGCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATGG > minE/299466‑299606 | tCGGGCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCA < 1:1717842‑M1/71‑1 (MQ=255) gggCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAAc < 1:15575/71‑1 (MQ=255) gCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTg < 1:3108751/71‑1 (MQ=255) aGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTc < 1:3943975/71‑1 (MQ=255) aGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTc > 1:1662152/1‑71 (MQ=255) gATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTgc > 1:262898/1‑71 (MQ=255) aTTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTgcg > 1:408681/1‑71 (MQ=255) ttCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTgcg > 1:858413/1‑69 (MQ=255) cccGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCActgcgcaggacagtt > 1:1323780‑M1/1‑56 (MQ=255) cccGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAg < 1:129772/70‑1 (MQ=255) cccGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGt < 1:2482831‑M2/71‑2 (MQ=255) cccGCGTCACTAATGACACTGAAGTGAT‑‑GCGATCTCTACGTTACCGTAGTGGCActgcgcaggacagttgc > 1:3094332‑M1/1‑54 (MQ=255) cgcgTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCActgcgcaggacagttgc < 1:2526947‑M1/71‑18 (MQ=255) cgcgTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGtgc > 1:755213‑M2/1‑68 (MQ=255) cgTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCcg > 1:915012/1‑71 (MQ=255) tCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCcgcg < 1:670691/71‑1 (MQ=255) tCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCcgcg < 1:2221062/71‑1 (MQ=255) cACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCACTGCcg > 1:2349365/1‑68 (MQ=255) aCTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAg < 1:2808236/62‑1 (MQ=255) aCTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCgcgc < 1:1680489/70‑1 (MQ=255) cTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCt < 1:1384836/70‑1 (MQ=255) tAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCaa > 1:3643361/1‑47 (MQ=255) tAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGtg < 1:110944‑M2/62‑3 (MQ=255) tAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCtgg > 1:1332607/1‑71 (MQ=255) aaTGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTgc < 1:3751705/55‑1 (MQ=255) aaTGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTgc < 1:2350622/55‑1 (MQ=255) aTGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCtggtg < 1:2910142/71‑1 (MQ=255) aTGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCtggtg < 1:1809003/71‑1 (MQ=255) aTGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCtgg > 1:3575318/1‑69 (MQ=255) acacTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGgc < 1:1477853/71‑1 (MQ=255) acTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGtgcc > 1:934838‑M2/1‑53 (MQ=255) tGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGa > 1:2297501/1‑71 (MQ=255) gAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCtggtgg < 1:2929602/64‑1 (MQ=255) aaGTGATCCGCGATCTCTACGTTACCGTAGTGGCActgcgcagga > 1:946123‑M1/1‑35 (MQ=255) aaGTGATCCGCGATCTCTACGTTACCGTAGTGGCActgcgcagga > 1:2048865‑M1/1‑35 (MQ=255) aaGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGa < 1:135401/69‑1 (MQ=255) aaGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATg > 1:2874975/1‑71 (MQ=255) gATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCtgg > 1:24418/1‑71 (MQ=255) gATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCtg > 1:2399534/1‑70 (MQ=255) gATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCtg > 1:2967594/1‑70 (MQ=255) aTCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCtggt < 1:2328342/71‑1 (MQ=255) aTCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCtgg < 1:882059/70‑1 (MQ=255) aTCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCCCTGGTGGGCGCGATGCtggt < 1:1456539/71‑1 (MQ=255) tCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCtggtg > 1:1942934/1‑71 (MQ=255) ccGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAg > 1:2173072/1‑42 (MQ=255) ccGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAg > 1:2160836/1‑42 (MQ=255) ccGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAg > 1:988273/1‑42 (MQ=255) gcgATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGc > 1:3306828/1‑63 (MQ=255) cgATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGa > 1:2965648/1‑71 (MQ=255) gATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGAt > 1:2933223/1‑71 (MQ=255) gATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGAt > 1:1969988/1‑71 (MQ=255) gATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGAt > 1:2576586/1‑71 (MQ=255) tctcTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCtg < 1:1738172/46‑1 (MQ=255) tACGTTACCGTAGTGTCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTc < 1:2627550/69‑1 (MQ=255) tACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGtt < 1:1833766/68‑1 (MQ=255) tACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAg > 1:1983272/1‑71 (MQ=255) cGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGcc < 1:2971211/71‑1 (MQ=255) cGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGcc > 1:2985807/1‑71 (MQ=255) tACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCt > 1:1204808/1‑36 (MQ=255) tACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTc > 1:3149829/1‑70 (MQ=255) aCCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCg < 1:1636805/70‑1 (MQ=255) ccGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGAc < 1:2807692/71‑1 (MQ=255) ccGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGAc < 1:684304/71‑1 (MQ=255) ccGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGAc < 1:3024323/71‑1 (MQ=255) cGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGAt < 1:2150769/57‑1 (MQ=255) gTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTg < 1:693530/71‑1 (MQ=255) tAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTgg > 1:1261956/1‑71 (MQ=255) gTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGc > 1:2348225/1‑70 (MQ=255) gTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCg < 1:3678108/71‑1 (MQ=255) ggCActgcgcaggacagttgccactacggtaacgtagagatcgcggatcacttcagt > 1:934838‑M1/1‑4 (MQ=255) gCActgcgcaggacagttgccactacggtaacgtagagatcgcggatcacttcagtgtcattagtgacgcg > 1:755213‑M1/1‑3 (MQ=255) gCAACTGTCCTGCGCAGtgccactacggtaacgtagagatcgcggatcacttcagtgtcattagtgacgcg < 1:2526947‑M2/71‑55 (MQ=255) gCAACTGTCCTGCGCAGtgccactacggtaacgtagagatcgcatcacttcagtgtcattagtgacgcggg > 1:3094332‑M2/1‑17 (MQ=255) gCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGAt < 1:1454097/50‑1 (MQ=255) gCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAAt < 1:2768379/71‑1 (MQ=255) gCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAAt < 1:179702/71‑1 (MQ=255) gCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAAt > 1:1844190/1‑71 (MQ=255) cActgcgcaggacagttgccactacggtaacgtagagatcgcggatcacttcagtgtcatta < 1:110944‑M1/62‑61 (MQ=255) actgcgcaggacagttgccactacggtaacgtagagatcgcggatcacttcagtgtcattagtgacgcggg < 1:2482831‑M1/71‑71 (MQ=255) aaCTGTCCTGCGCAGtgccactacggtaacgtagagatcgcggatcacttcagtgtcattagtgacgcggg > 1:1323780‑M2/1‑15 (MQ=255) aaCTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATgg > 1:205997/1‑71 (MQ=255) aaCTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATgg > 1:3266541/1‑71 (MQ=255) | TCGGGCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATGG > minE/299466‑299606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |