| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 299638 = | 46 (0.890) | 6 (0.130) | 4/90 | NT | 11.6% | coding (534/1782 nt) | mdlB | fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily |
| ? | minE | 299664 = | 51 (1.120) | coding (560/1782 nt) | mdlB | fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily | |||||
ATATCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCTGGTATATCACCATTACCACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/299712‑299638‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcGTTACAGCACGCCGATTGTCCGTCGTGTGCGCGCCTATTTGGCGGATATCAACGACGGCTTTAACGAAA > minE/299664‑299732 ATATCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCTGGTATATCACCATTACCAC > 1:2549272/1‑71 TATCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCTGGTATATCACCATTACCAC > 1:403701/1‑70 TCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCTGGTATATCACCATTACCACCAG > 1:1390690/1‑71 TCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCTGGTATATCACCATTACCACCAG < 1:2325533/71‑1 TCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCTGGTATATCACCATTACCACCA < 1:2499293/70‑1 AAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCTGGTATATCACCATTACCACCAG < 1:3752844/65‑1 ACGCTGGTATATCACCATTACCACCAGCGTTACAGCACGCCGATTGTCCGTCGTGTGCGCGCCTATTTGGC > 1:2003416/1‑71 TGGTATATCACCATTACCACCAGCGTTACAGCACGCCGATTGTCCGTCG > 1:1093563/1‑49 TGGTATATCACCATTACCACCAGCGTTACAGCACGCCGATTGTCCGTCG > 1:1808208/1‑49 ATATCACCATTACCACCAGCGTTACAGCACGCCGATTGTCCGTC < 1:3806215/44‑1 ATCACCATTACCACCAGCGTTACAGCACGCCGATTGTCCGTCGT > 1:2266549/1‑44 ATCACCATTACCACCAGCGTTACAGCACGCCGATTGTCCGTCGT > 1:677925/1‑44 CAGCGTTACAGCACGCCGATTGTCCGTCGTGTGCGCGCCTATTTGGCGGATATCAACGACGGCTTTAACG > 1:3431425/1‑70 GCGTTACAGCACGCCGATTGTCCGTCGTGTGCGCGCCTATTTGGCGGATATCAACGACGGCTTTAACGAAA > 1:1664841/1‑71 GCGTTACAGCACGCCGATTGTCCGTCGTGTGCGCGCCTATTTGGCGGATATCAACGACGGCTTTAACGAAA > 1:582647/1‑71 GCGTTACAGCACGCCGATTGTCCGTCGTGTGCGCGCCTATTTGG > 1:2100377/1‑44 GCGTTACAGCACGCCGATTGTCCGTCGTGTGCGCGCCTATTTGG > 1:2177292/1‑44 CGTTACAGCACGCCGATTGTCCGTCGAGTGCGCGCCTATTTGGAGGATATCAACG > 1:2863496/1‑55 ATATCCGCCAAATAGGCGCGCACACGACGGACAATCGGCGTGCTGTAACGCTGGTATATCACCATTACCACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/299712‑299638‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcGTTACAGCACGCCGATTGTCCGTCGTGTGCGCGCCTATTTGGCGGATATCAACGACGGCTTTAACGAAA > minE/299664‑299732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |