| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 436259 = | 61 (1.180) | 110 (2.300) | 55/94 | NT | 70.5% | intergenic (‑156/‑29) | ybfF/seqA | conserved hypothetical protein/regulatory protein for replication initiation |
| ? | minE | = 2706018 | 36 (0.750) | coding (836/837 nt) | dam | DNA adenine methylase | |||||
Only 100 of 153 total aligned reads displayed.
GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/436331‑436259‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGTGC < minE/2706018‑2705949 GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGA < 1:3439700/71‑1GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGA < 1:3900844/71‑1GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG > 1:3556191/1‑70GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG > 1:1501053/1‑70GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG > 1:519396/1‑70 ATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT < 1:698546/70‑1 TATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTA > 1:301524/1‑71 TATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTA > 1:2650279/1‑71 TATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTA > 1:2646226/1‑71 TATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATT > 1:1925857/1‑70 CTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTT > 1:2219539/1‑71 TGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGAAGTGTCTTAGCTGAATTATTTTT > 1:1494983/1‑70 GTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTC > 1:2971507/1‑71 GTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTA > 1:443806/1‑64 TAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCG > 1:2766197/1‑71 TAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCG < 1:1373067/71‑1 TAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTC < 1:2100927/70‑1 TAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTC < 1:3681317/70‑1 TAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTC < 1:851642/70‑1 TAGAGTTCATCATCAACTTCAATCGTTTTCAACTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCG < 1:1852432/71‑1 AGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGC > 1:3388269/1‑71 GAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCG < 1:16660/71‑1 GAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGC < 1:2410723/70‑1 GAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGC < 1:3378827/70‑1 GAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGC < 1:715308/70‑1 AGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGG < 1:1709215/71‑1 AGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGG < 1:1233615/71‑1 GTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGG > 1:3272314/1‑71 GTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGG > 1:2110336/1‑71 GTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGG < 1:1406345/71‑1 aATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTG > 1:3876955/2‑70 CATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTG < 1:1366932/70‑1 CATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTG > 1:3624593/1‑70 ATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGTGTGAA < 1:815740/71‑1 ATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAA < 1:1614712/71‑1 ATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGA < 1:167178/70‑1 ATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGA < 1:2852006/70‑1 ATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGA < 1:1711008/70‑1 ATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGA < 1:3724268/70‑1 ATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATT < 1:3280224/54‑1 TCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGA < 1:3940763/71‑1 TCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAA > 1:3142503/1‑68 CAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTAT > 1:2231603/1‑51 AACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCG > 1:201234/1‑59 CTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGC < 1:3148649/56‑1 CTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTC > 1:917233/1‑54 CTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTG > 1:2615958/1‑42 TTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCT > 1:3049732/1‑71 TTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCG < 1:2615390/54‑1 TCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGA > 1:3674725/1‑65 CAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTA > 1:3357469/1‑44 AATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑T < 1:489881/71‑1 ATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TT > 1:968067/1‑71 ATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAAC < 1:1012228/60‑1 ATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAAC < 1:2018716/60‑1 TCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTT > 1:3606787/1‑71 TCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGA < 1:2728378/56‑1 GTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTG < 1:1798000/70‑1 CATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAA < 1:1564250/70‑1 CATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAA < 1:3258155/70‑1 ATCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAA < 1:2129299/70‑1 TCTTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACT < 1:1224621/54‑1 TTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGC > 1:3055609/1‑69 TTAATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAA > 1:3021502/1‑47 AATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAG < 1:142552/70‑1 AATCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAG < 1:258970/70‑1 TCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCT > 1:1199263/1‑51 TCCAGTGCAGTGTCTTAGCTGAATTATTTTTTCGC < 1:1006296/35‑1 CAGTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTGCTGGCTTTGTACAAA‑CCAGGAGTc < 1:933469/71‑2 GTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCG > 1:2340616/1‑71 GTGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCG > 1:1341805/1‑71 TGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAA > 1:2925001/1‑57 TGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAA > 1:2873203/1‑38 TGCAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGA > 1:2510263/1‑36 CAGTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGC > 1:3583885/1‑62 CAGTGTCTTAGCTGAATTATTTTTTCGAGGGTGAA < 1:2134700/35‑1 GTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCAC > 1:1563544/1‑71 GTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG < 1:529778/44‑1 GTGTCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG < 1:376141/44‑1 TCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTT > 1:2999065/1‑71 TCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTT < 1:3865166/71‑1 TCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTT > 1:3103465/1‑71 TCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCT > 1:892509/1‑70 TCTTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑T < 1:2880702/42‑1 TTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTT > 1:175481/1‑71 TTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTT > 1:1153963/1‑71 TTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCA < 1:1945748/56‑1 TTAGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTT > 1:2262217/1‑42 TAGCTGAATTATTTTTTCG‑GGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTA > 1:1573152/1‑71 AGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTT < 1:1624285/70‑1 AGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTT < 1:2810192/70‑1 AGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTT < 1:21047/69‑1 AGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTT < 1:3492306/69‑1 AGCTGAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTT < 1:3349126/68‑1 GAATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAA > 1:928145/1‑43 AATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTG < 1:2261338/70‑1 AATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTC < 1:3931381/53‑1 AATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCA < 1:1841137/46‑1 ATTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGTG > 1:2912564/1‑71 TTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGTGC > 1:1329350/1‑71 GCAATATAGCTGTAGAGTTCATCATCAACTTCAATCGTTTTCATCTTAATCCAGTGCAGTGTCTTAGCTGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/436331‑436259‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatTATTTTTTCGCGGGTGAAACGACTCCTGG‑TTTGTACAAAGCCAGCAGTTCGTCCACCTTTTTACGTGTGC < minE/2706018‑2705949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |