New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 494276 | 55 (1.060) | 3 (0.070) | 3/90 | NT | 5.4% | coding (1017/1041 nt) | galM | galactose‑1‑epimerase |
? | minE | = 494284 | 57 (1.250) | coding (1009/1041 nt) | galM | galactose‑1‑epimerase |
GTGATTTGAACAATATGAGATAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/494205‑494276 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattccAGCCTGACGGAATATCAGTTTATTGCTGAGTAATGTTACGCCCTCGTCATGAGGGCTTTATCTCA < minE/494284‑494220 GTGATTTGAACAATATGAGATAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTC > 1:2255091/1‑71 GATTTGAACAATATGAGATAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCC < 1:324536/70‑1 ATATGAGATAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATT < 1:8924/58‑1 TGAGATAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCAGCCTGACGGAATA < 1:557754/71‑1 AGATAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCAGCCTGACGGAATAT < 1:174508/70‑1 TAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCAGCCTGACGGAATATCA < 1:2151037/69‑1 CATGACGAGGGCGTAACATTACTCAGCAATAAACTGATAT < 1:2173580/40‑1 ATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTC > 1:2303077/1‑41 TGACGAGGGCGTAACATTACTCAGCAATAAACTGAT > 1:2918758/1‑36 TATTCCAGCCTGACGGAATATCAGTTTATTGCTGAGTAATGTTACGCCCTCGTCATGAGGGCTTTATCTCA > 1:2570465/1‑71 CCAGCCTGACGGAATATCAGTTTATTGCTGAGTAATGTTACGCCCTCGTCATGAGGGCTTTAT > 1:161167/1‑63 CCAGCCTGACGGAATATCAGTTTATTGCTGAGTAATGTTACGCCCTCGTCATGAGGGCTTTAT > 1:1875632/1‑63 GTGATTTGAACAATATGAGATAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/494205‑494276 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattccAGCCTGACGGAATATCAGTTTATTGCTGAGTAATGTTACGCCCTCGTCATGAGGGCTTTATCTCA < minE/494284‑494220 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |