| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 494276 | 55 (1.060) | 3 (0.070) | 3/90 | NT | 5.4% | coding (1017/1041 nt) | galM | galactose‑1‑epimerase |
| ? | minE | = 494284 | 57 (1.250) | coding (1009/1041 nt) | galM | galactose‑1‑epimerase | |||||
TGAGATAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCGGGCTGTCCGG > minE/494220‑494353 | tGAGATAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTggaata > 1:2570465‑M2/1‑65 (MQ=255) agaTAAAGCCCTCATGACGAGGGCTTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATAc < 1:2802094/70‑1 (MQ=255) agaTAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATAc < 1:1265139/70‑1 (MQ=255) aTAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTgg > 1:161167‑M2/1‑61 (MQ=255) aTAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTgg > 1:1875632‑M2/1‑61 (MQ=255) aTAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATActct < 1:2365496/71‑1 (MQ=255) tAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCtt < 1:2438087/71‑1 (MQ=255) tacgCCCTCGTCATGAGGGCTTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTc > 1:2839364/4‑71 (MQ=37) aaaGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTc > 1:313828/1‑71 (MQ=255) aaaGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTc > 1:3600475/1‑71 (MQ=255) aaaGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGGCAGGCTGGAATActct < 1:615108/69‑1 (MQ=255) aaaGCCCTCATGACGAGGGCGTAACATTACTCACCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTc > 1:3450108/1‑71 (MQ=255) aaGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCtttg < 1:2859104/71‑3 (MQ=255) aaGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCg < 1:2390831/71‑1 (MQ=255) aGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGc > 1:521617/1‑71 (MQ=255) aGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGc > 1:536162/1‑71 (MQ=255) gCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGc > 1:38190/1‑70 (MQ=255) gCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGc > 1:223507/1‑70 (MQ=255) cccTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGc > 1:3026590/1‑69 (MQ=255) ccTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCa < 1:2660537/70‑1 (MQ=255) cTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAgg < 1:968940/71‑1 (MQ=255) cTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAgg < 1:973638/71‑1 (MQ=255) tCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGa > 1:2735476/1‑71 (MQ=255) cATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGAc > 1:122723/1‑71 (MQ=255) aTGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATAc < 1:1808393/57‑1 (MQ=255) aTGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGAc > 1:514216/1‑70 (MQ=255) aTGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACg > 1:1100343/1‑71 (MQ=255) aTGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACg > 1:3195979/1‑71 (MQ=255) tGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGc < 1:2478779/71‑1 (MQ=255) gACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATActc > 1:2894535/1‑57 (MQ=255) cGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAgg < 1:2216662/71‑1 (MQ=255) gAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGa < 1:2520811/71‑1 (MQ=255) aGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAgg > 1:3532546/1‑69 (MQ=255) gggCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAg > 1:2341620/1‑67 (MQ=255) gggCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAg > 1:3415131/1‑67 (MQ=255) gggCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAg < 1:3333641/71‑1 (MQ=255) gggCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAg < 1:315921/71‑1 (MQ=255) gCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAg > 1:1732307/1‑69 (MQ=255) cGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAg < 1:3591101/71‑1 (MQ=255) gTAACATTACTCAGCAATAAACTGATATTCCGTCAGTCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGt < 1:1053346/71‑1 (MQ=255) aaCATTACTCAGCAATAAACTGATATTCCGACAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTc < 1:1892825/70‑1 (MQ=255) aTTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCa > 1:357569/1‑57 (MQ=255) ttACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGtt < 1:3019532/71‑1 (MQ=255) ttACTCAGCAATAAACTGATATTACGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGtt < 1:3355547/71‑1 (MQ=255) tACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGt > 1:1417328/1‑69 (MQ=255) cTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGc < 1:571569/70‑1 (MQ=255) aGCAATAAACTGATATTCCGTCAGGCTGGAATACTCtt > 1:3806951/1‑38 (MQ=255) aGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGa > 1:1714262/1‑46 (MQ=255) aTAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTc < 1:2507686/71‑1 (MQ=255) tAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCa < 1:329756/71‑1 (MQ=255) aaCTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAgg > 1:2716294/1‑71 (MQ=255) aaCTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAg < 1:3331182/70‑1 (MQ=255) tGATATTCCGTCAGGCTggaatatcagtttattgctgagtaatgttacgccctcgtcatgagggcttta < 1:2151037‑M2/69‑53 (MQ=255) tGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAg > 1:3202642/1‑45 (MQ=255) tGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGc > 1:577015/1‑60 (MQ=255) tGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGggtg > 1:854751/1‑71 (MQ=255) gATATTCCGTCAGGCTGTAATACTCTTCGCCAGGAc < 1:2060068/36‑1 (MQ=255) atatTCCGTCAGGCTggaatatcagtttattgctgagtaatgttacgccctcgtcatgagggctttatct < 1:174508‑M2/70‑56 (MQ=255) tatTCCGTCAGGCTggaatatcagtttattgctgagtaatgttacgccctcgtcatgagggctttatctca < 1:557754‑M2/71‑58 (MQ=255) atTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAgg > 1:928694/1‑38 (MQ=255) atTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTc > 1:2357700/1‑71 (MQ=255) atTCCGTCAGGCTGGAATACTATTCGCCAGGACGCAGGAAGCAGTcc > 1:3801194/1‑47 (MQ=255) ttCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTc < 1:3702001/70‑1 (MQ=255) ttCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCg < 1:2569019/71‑1 (MQ=255) ttCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCg < 1:1100759/71‑1 (MQ=255) tCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCg < 1:3163825/70‑1 (MQ=255) ccGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCgg > 1:912211/1‑70 (MQ=255) cGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCggg < 1:520383/70‑1 (MQ=255) gTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCGGGCt > 1:635945/1‑71 (MQ=255) tCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCggg > 1:3528370/1‑68 (MQ=255) tCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCggg > 1:2114686/1‑68 (MQ=255) tCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCggg > 1:225141/1‑68 (MQ=255) aGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCg > 1:1225487/1‑46 (MQ=255) cTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCGGGCTGTCCgg < 1:1383650/71‑1 (MQ=255) | TGAGATAAAGCCCTCATGACGAGGGCGTAACATTACTCAGCAATAAACTGATATTCCGTCAGGCTGGAATACTCTTCGCCAGGACGCAGGAAGCAGTCCGGTTGCGGCCATTCAGGGTGGTTCGGGCTGTCCGG > minE/494220‑494353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |